Sbrasiliensis5110 Sporothrix brasiliensis 5110

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence medium, AWTV01000010:1610857-1620403

MATPredictFungiDBMAT1-2-1 (core_MAT) AWTV01000010:1611588-1611803 - identity 68.6MAT1-2-1SLA2 (flanking_conserved) AWTV01000010:1616939-1620403 - identity 93.9SLA2SPBR_08948 1610857-1611538 -: mating type protein 1-2-1SPBR_08948SPBR_05447 1611588-1611803 -: hypothetical proteinSPBR_05447SPBR_04770 1613135-1615207 +: hypothetical proteinSPBR_04770SPBR_04592 1616939-1620403 -: I/LWEQ domain | ANTH domain | domain-containing proteinSPBR_04592SPBR_04546 1621244-1626235 +: DNA polymerase zeta catalyticSPBR_045461606 kb1608 kb1610 kb1612 kb1614 kb1616 kb1618 kb1620 kb1622 kb1624 kbAWTV01000010
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MAT1-2-1core_MAT1611588-1611803 -annotatedSPBR_05447hypothetical proteinSPBR_05447 covers 100% of it on the same strand
SLA2flanking_conserved1616939-1620403 -annotatedSPBR_04592I/LWEQ domain | ANTH domain | domain-containing proteinSPBR_04592 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
SPBR_089481610857-1611538 -mating type protein 1-2-1
SPBR_047701613135-1615207 +hypothetical protein