RmicrosporusATCC52814 Rhizopus microsporus var. microsporus ATCC 52814

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Mucoromycota_MAT_0: Minus Mucoromycota:MAT, confidence high, KV922032:10201-19021

MATPredictFungiDBglrA (flanking_variable) KV922032:10201-11754 + identity 98.3glrArnhA (flanking_conserved) KV922032:14493-18370 - identity 92.9rnhAsexM (core_MAT) KV922032:18434-18880 - identity 93.2sexMBCV72DRAFT_43730 5627-6423 -: unspecified productBCV72DRAFT_43730BCV72DRAFT_43735 7617-10180 +: SacI homology domain | domain-containing proteinBCV72DRAFT_43735BCV72DRAFT_43741 10182-11914 +: Pyridine nucleotide-disulphide oxidoreductase | Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain | domain-containing proteinBCV72DRAFT_43741BCV72DRAFT_234133 12112-13971 -: unspecified productBCV72DRAFT_234133BCV72DRAFT_234153 14122-18413 -: P-loop containing nucleoside triphosphate hydrolase proteinBCV72DRAFT_234153BCV72DRAFT_234155 18390-19052 -: HMG (high mobility group) box | domain-containing proteinBCV72DRAFT_234155BCV72DRAFT_338465 19701-22344 +: ubiquitin binding proteinBCV72DRAFT_338465BCV72DRAFT_t45 22528-22599 +: tRNA-GluBCV72DRAFT_t456 kb8 kb10 kb12 kb14 kb16 kb18 kb20 kb22 kb24 kbKV922032
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
glrAflanking_variable10201-11754 +annotatedBCV72DRAFT_43741Pyridine nucleotide-disulphide oxidoreductase | Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain | domain-containing proteinBCV72DRAFT_43741 covers 100% of it on the same strand
rnhAflanking_conserved14493-18370 -annotatedBCV72DRAFT_234153P-loop containing nucleoside triphosphate hydrolase proteinBCV72DRAFT_234153 covers 100% of it on the same strand
sexMcore_MAT18434-18880 -annotatedBCV72DRAFT_234155HMG (high mobility group) box | domain-containing proteinBCV72DRAFT_234155 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
BCV72DRAFT_23413312112-13971 -unspecified product