CaurisB8441 Candida auris strain B8441

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MTL_0: A Ascomycota:MTL, confidence high, PEKT02000003:845925-853762

MATPredictFungiDBPAP1 (flanking_variable) PEKT02000003:845925-847559 - identity 100.0PAP1OBP1 (flanking_variable) PEKT02000003:847786-849075 + identity 100.0OBP1PIK1 (flanking_variable) PEKT02000003:849738-852365 + identity 100.0PIK1MTLA2 (core_MAT) PEKT02000003:852451-853064 + identity 98.68MTLA2MTLA1 (core_MAT) PEKT02000003:853144-853762 + identity 100.0MTLA1B9J08_001451 841925-843226 +: Protein arginine N-methyltransferase 2B9J08_001451B9J08_001452 844401-845882 +: Insulinase (Peptidase family M16) | Peptidase M16 inactive domain | domain-containing proteinB9J08_001452B9J08_001453 845925-847559 -: Poly(A) polymerase PAPaB9J08_001453B9J08_001454 847786-849075 +: Oxysterol-binding protein | domain-containing proteinB9J08_001454B9J08_001455 849738-852365 +: Phosphatidylinositol 3- and 4-kinase | Yeast phosphatidylinositol-4-OH kinase Pik1 | domain-containing proteinB9J08_001455B9J08_001456 853714-856101 -: hypothetical proteinB9J08_001456B9J08_001457 856911-859346 +: Exocyst complex component Sec10-like, alpha-helical bundle | domain-containing proteinB9J08_001457842 kb844 kb846 kb848 kb850 kb852 kb854 kb856 kb858 kbPEKT02000003
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
PAP1flanking_variable845925-847559 -annotatedB9J08_001453Poly(A) polymerase PAPaB9J08_001453 covers 100% of it on the same strand
OBP1flanking_variable847786-849075 +annotatedB9J08_001454Oxysterol-binding protein | domain-containing proteinB9J08_001454 covers 100% of it on the same strand
PIK1flanking_variable849738-852365 +annotatedB9J08_001455Phosphatidylinositol 3- and 4-kinase | Yeast phosphatidylinositol-4-OH kinase Pik1 | domain-containing proteinB9J08_001455 covers 100% of it on the same strand
MTLA2core_MAT852451-853064 +novel—no FungiDB gene overlaps this MATPredict gene
MTLA1core_MAT853144-853762 +partialB9J08_001456hypothetical proteinB9J08_001456 overlaps 8% but on the opposite strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
B9J08_001456853714-856101 -hypothetical protein