CglobosumCBS148.51 Chaetomium globosum CBS 148.51

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, CH408031:3982542-3997302

MATPredictFungiDBCOX13 (flanking_conserved) CH408031:3982542-3983363 - identity 63.5COX13APN2 (flanking_conserved) CH408031:3984073-3986398 + identity 84.1APN2MAT1-1-3 (core_MAT) CH408031:3987784-3988623 - identity 46.9MAT1-1-3MAT1-1-2 (core_MAT) CH408031:3989174-3990529 + identity 33.5MAT1-1-2MAT1-1-1 (core_MAT) CH408031:3990896-3991905 + identity 57.1MAT1-1-1SLA2 (flanking_conserved) CH408031:3993932-3997302 - identity 80.9SLA2CHGG_06580 3975801-3978444 +: RING-type domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q2H435]CHGG_06580CHGG_06581 3979361-3981825 +: Anaphase-promoting complex subunit 5 [Source:UniProtKB/TrEMBL;Acc:Q2H434]CHGG_06581CHGG_06582 3982542-3983363 -: unspecified productCHGG_06582CHGG_06583 3984073-3986398 +: Endo/exonuclease/phosphatase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q2H432]CHGG_06583CHGG_06584 3987784-3988623 -: HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q2H431]CHGG_06584CHGG_06585 3989174-3990529 +: unspecified productCHGG_06585CHGG_06586 3990896-3991905 +: Alpha box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q2H429]CHGG_06586CHGG_06587 3993932-3997302 -: conserved hypothetical proteinCHGG_06587CHGG_06588 ATG3 3998090-3999244 +: Autophagy-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q2H427]CHGG_06588 ATG3CHGG_06589 3999399-4000567 -: Pre-mRNA-splicing factor CWC24 [Source:UniProtKB/TrEMBL;Acc:Q2H426]CHGG_06589CHGG_06590 4001573-4007019 -: PH domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q2H425]CHGG_065903980 kb3984 kb3988 kb3992 kb3996 kb4000 kbCH408031
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved3982542-3983363 -annotatedCHGG_06582unspecified productCHGG_06582 covers 100% of it on the same strand
APN2flanking_conserved3984073-3986398 +annotatedCHGG_06583Endo/exonuclease/phosphatase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q2H432]CHGG_06583 covers 100% of it on the same strand
MAT1-1-3core_MAT3987784-3988623 -annotatedCHGG_06584HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q2H431]CHGG_06584 covers 100% of it on the same strand
MAT1-1-2core_MAT3989174-3990529 +annotatedCHGG_06585unspecified productCHGG_06585 covers 100% of it on the same strand
MAT1-1-1core_MAT3990896-3991905 +annotatedCHGG_06586Alpha box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q2H429]CHGG_06586 covers 100% of it on the same strand
SLA2flanking_conserved3993932-3997302 -annotatedCHGG_06587conserved hypothetical proteinCHGG_06587 covers 100% of it on the same strand