CaurisB11221 Candida auris strain B11221

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MTL_0: alpha Ascomycota:MTL, confidence high, PGLS01000002:189357-195813

MATPredictFungiDBPAP1 (flanking_variable) PGLS01000002:189357-191045 + identity 100.0PAP1MTLalpha1 (core_MAT) PGLS01000002:191042-191560 - identity 100.0MTLalpha1PIK1 (flanking_variable) PGLS01000002:191653-194448 - identity 100.0PIK1OBP1 (flanking_variable) PGLS01000002:194620-195813 - identity 100.0OBP1CJI97_001147 183683-186118 -: unspecified productCJI97_001147CJI97_001148 186929-189259 +: unspecified productCJI97_001148CJI97_001149 189357-191045 +: Poly(A) polymerase PAPalphaCJI97_001149CJI97_005719 191042-191560 -: mating type MTLalpha1CJI97_005719CJI97_001150 191653-194448 -: unspecified productCJI97_001150CJI97_001151 194620-195813 -: unspecified productCJI97_001151CJI97_001152 196485-197966 -: unspecified productCJI97_001152CJI97_001153 199142-200443 -: unspecified productCJI97_001153186 kb188 kb190 kb192 kb194 kb196 kb198 kb200 kbPGLS01000002
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
PAP1flanking_variable189357-191045 +annotatedCJI97_001149Poly(A) polymerase PAPalphaCJI97_001149 covers 100% of it on the same strand
MTLalpha1core_MAT191042-191560 -annotatedCJI97_005719mating type MTLalpha1CJI97_005719 covers 100% of it on the same strand
PIK1flanking_variable191653-194448 -annotatedCJI97_001150unspecified productCJI97_001150 covers 100% of it on the same strand
OBP1flanking_variable194620-195813 -annotatedCJI97_001151unspecified productCJI97_001151 covers 100% of it on the same strand