AnigerATCC13496 Aspergillus niger ATCC 13496

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, KZ851904:1021188-1052765

MATPredictFungiDBSLA2 (flanking_conserved) KZ851904:1021188-1025012 + identity 90.1SLA2MAT1-1-3 (core_MAT) KZ851904:1038080-1038172 + identity 41.935MAT1-1-3COX13 (flanking_conserved) KZ851904:1045945-1046660 - identity 77.3COX13APN2 (flanking_conserved) KZ851904:1047196-1049331 + identity 90.9APN2MAT1-1-1 (core_MAT) KZ851904:1051608-1052765 + identity 50.4MAT1-1-1M747DRAFT_293483 1016972-1020540 +: hypothetical proteinM747DRAFT_293483M747DRAFT_321498 1020889-1025286 +: cytoskeleton assembly control protein Sla2M747DRAFT_321498M747DRAFT_302822 1025285-1027028 -: salicylate hydroxylaseM747DRAFT_302822M747DRAFT_155710 1027255-1029050 -: CoA-transferase family IIIM747DRAFT_155710M747DRAFT_293486 1029454-1031150 +: aldehyde dehydrogenase family proteinM747DRAFT_293486M747DRAFT_231416 1031305-1032696 -: WD40 repeat-like proteinM747DRAFT_231416M747DRAFT_293487 1033708-1035560 -: aspartic proteaseM747DRAFT_293487M747DRAFT_321502 1036592-1038022 +: nucleotide-diphospho-sugar transferaseM747DRAFT_321502M747DRAFT_231184 1038617-1039616 -: HAD-like proteinM747DRAFT_231184M747DRAFT_321504 1039821-1041744 -: hypothetical proteinM747DRAFT_321504M747DRAFT_293489 1042626-1045715 +: anaphase-promoting complex subunit Apc5M747DRAFT_293489M747DRAFT_155756 1045758-1046736 -: mitochondrial cytochrome c oxidase subunit VIaM747DRAFT_155756M747DRAFT_254885 1046996-1049411 +: DNA lyase Apn2M747DRAFT_254885M747DRAFT_362062 1051608-1053141 +: mating-type protein MAT alpha 1M747DRAFT_362062M747DRAFT_155824 1053142-1053879 -: hypothetical proteinM747DRAFT_155824M747DRAFT_293491 1053563-1054382 -: hypothetical proteinM747DRAFT_293491M747DRAFT_275214 1055431-1056683 +: hypothetical proteinM747DRAFT_275214M747DRAFT_254891 1056843-1058080 +: SAICAR synthetaseM747DRAFT_2548911020 kb1024 kb1028 kb1032 kb1036 kb1040 kb1044 kb1048 kb1052 kb1056 kbKZ851904
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved1021188-1025012 +annotatedM747DRAFT_321498cytoskeleton assembly control protein Sla2M747DRAFT_321498 covers 100% of it on the same strand
MAT1-1-3core_MAT1038080-1038172 +novel—no FungiDB gene overlaps this MATPredict gene
COX13flanking_conserved1045945-1046660 -annotatedM747DRAFT_155756mitochondrial cytochrome c oxidase subunit VIaM747DRAFT_155756 covers 100% of it on the same strand
APN2flanking_conserved1047196-1049331 +annotatedM747DRAFT_254885DNA lyase Apn2M747DRAFT_254885 covers 100% of it on the same strand
MAT1-1-1core_MAT1051608-1052765 +annotatedM747DRAFT_362062mating-type protein MAT alpha 1M747DRAFT_362062 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
M747DRAFT_3028221025285-1027028 -salicylate hydroxylase
M747DRAFT_1557101027255-1029050 -CoA-transferase family III
M747DRAFT_2934861029454-1031150 +aldehyde dehydrogenase family protein
M747DRAFT_2314161031305-1032696 -WD40 repeat-like protein
M747DRAFT_2934871033708-1035560 -aspartic protease
M747DRAFT_3215021036592-1038022 +nucleotide-diphospho-sugar transferase
M747DRAFT_2311841038617-1039616 -HAD-like protein
M747DRAFT_3215041039821-1041744 -hypothetical protein
M747DRAFT_2934891042626-1045715 +anaphase-promoting complex subunit Apc5