Ureesii1704 Uncinocarpus reesii 1704

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, CH476615:850079-860229

MATPredictFungiDBAPN2 (flanking_conserved) CH476615:850079-851773 + identity 84.2APN2MAT1-1-4 (core_MAT) CH476615:852401-853119 + identity 60.5MAT1-1-4MAT1-1-1 (core_MAT) CH476615:854098-855328 + identity 70.3MAT1-1-1SLA2 (flanking_conserved) CH476615:856813-860229 - identity 94.3SLA2UREG_00452 845238-846953 +: unspecified productUREG_00452UREG_00453 850079-851773 +: DNA-(apurinic or apyrimidinic site) endonuclease 2UREG_00453UREG_00454 852401-853119 +: unspecified productUREG_00454UREG_00455 854098-855328 +: Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinUREG_00455UREG_00456 856813-860229 -: SLA2 proteinUREG_00456UREG_00457 861188-863928 -: Maintenance of mitochondrial morphology protein 1 | Pleckstrin homology domain | domain-containing proteinUREG_00457846 kb848 kb850 kb852 kb854 kb856 kb858 kb860 kb862 kb864 kbCH476615
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
APN2flanking_conserved850079-851773 +annotatedUREG_00453DNA-(apurinic or apyrimidinic site) endonuclease 2UREG_00453 covers 100% of it on the same strand
MAT1-1-4core_MAT852401-853119 +annotatedUREG_00454unspecified productUREG_00454 covers 100% of it on the same strand
MAT1-1-1core_MAT854098-855328 +annotatedUREG_00455Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinUREG_00455 covers 100% of it on the same strand
SLA2flanking_conserved856813-860229 -annotatedUREG_00456SLA2 proteinUREG_00456 covers 100% of it on the same strand