TtonsuransCBS112818 Trichophyton tonsurans CBS 112818

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, GG698488:411690-423854

MATPredictFungiDBMAT1-2-4 (core_MAT) GG698488:411690-411920 - identity 28.205MAT1-2-4CIMG_00407 (core_MAT) GG698488:411693-411842 - identity 37.255CIMG_00407MAT1-1-1 (core_MAT) GG698488:412552-413756 - identity 53.7MAT1-1-1MAT1-1-4 (core_MAT) GG698488:414426-415692 - identity 42.9MAT1-1-4APN2 (flanking_conserved) GG698488:416461-418536 - identity 76.6APN2COX13 (flanking_conserved) GG698488:418814-419454 + identity 68.5COX13SLA2 (flanking_conserved) GG698488:419894-423854 - identity 88.1SLA2TESG_03028 406091-407987 +: oxidoreductaseTESG_03028TESG_03029 408520-409780 +: 40S ribosomal protein S4TESG_03029TESG_03030 411522-412425 -: unspecified productTESG_03030TESG_03031 412552-413756 -: alpha-box mating type proteinTESG_03031TESG_03032 414426-415692 -: unspecified productTESG_03032TESG_03033 416461-418536 -: DNA lyaseTESG_03033TESG_03034 418814-419454 +: cytochrome c oxidase subunit VIaTESG_03034TESG_03035 419894-423854 -: cytoskeleton assembly control protein Sla2TESG_03035TESG_03036 424393-427093 -: Pleckstrin homology domain | domain-containing proteinTESG_03036TESG_03037 427531-428126 -: HHE domain-containing proteinTESG_03037TESG_03038 428780-429849 -: unspecified productTESG_03038408 kb410 kb412 kb414 kb416 kb418 kb420 kb422 kb424 kb426 kb428 kbGG698488
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MAT1-2-4core_MAT411690-411920 -annotatedTESG_03030unspecified productTESG_03030 covers 100% of it on the same strand
CIMG_00407core_MAT411693-411842 -annotatedTESG_03030unspecified productTESG_03030 covers 100% of it on the same strand
MAT1-1-1core_MAT412552-413756 -annotatedTESG_03031alpha-box mating type proteinTESG_03031 covers 100% of it on the same strand
MAT1-1-4core_MAT414426-415692 -annotatedTESG_03032unspecified productTESG_03032 covers 100% of it on the same strand
APN2flanking_conserved416461-418536 -annotatedTESG_03033DNA lyaseTESG_03033 covers 100% of it on the same strand
COX13flanking_conserved418814-419454 +annotatedTESG_03034cytochrome c oxidase subunit VIaTESG_03034 covers 100% of it on the same strand
SLA2flanking_conserved419894-423854 -annotatedTESG_03035cytoskeleton assembly control protein Sla2TESG_03035 covers 100% of it on the same strand