TthermophilusATCC42464 Thermothelomyces thermophilus ATCC 42464

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, CP003002:7698571-7713422

MATPredictFungiDBCOX13 (flanking_conserved) CP003002:7698571-7699404 - identity 67.4COX13APN2 (flanking_conserved) CP003002:7700136-7702386 + identity 81.8APN2MAT1-1-3 (core_MAT) CP003002:7703805-7704638 - identity 45.3MAT1-1-3MAT1-1-2 (core_MAT) CP003002:7705124-7706481 + identity 29.3MAT1-1-2MAT1-1-1 (core_MAT) CP003002:7707115-7707935 + identity 23.5MAT1-1-1SLA2 (flanking_conserved) CP003002:7710010-7713422 - identity 80.4SLA2MYCTH_2298228 7691968-7695211 +: RING-type E3 ubiquitin transferaseMYCTH_2298228MYCTH_2054145 7695643-7698132 +: Anaphase-promoting complex subunit 5 | domain-containing proteinMYCTH_2054145MYCTH_2298230 7698340-7699587 -: Cytochrome c oxidase subunit VIa | domain-containing proteinMYCTH_2298230MYCTH_2298234 7699767-7702650 +: DNA-(apurinic or apyrimidinic site) endonuclease 2MYCTH_2298234MYCTH_2115740 7703805-7704638 -: HMG (high mobility group) box | domain-containing proteinMYCTH_2115740MYCTH_2107654 7705124-7706481 +: Mating type protein 1-1-2 of unknown function | domain-containing proteinMYCTH_2107654MYCTH_2298236 7707055-7707977 +: Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinMYCTH_2298236MYCTH_2298240 7709772-7713802 -: I/LWEQ domain | ANTH domain | domain-containing proteinMYCTH_2298240MYCTH_2298243 7714187-7715588 +: Autophagocytosis associated protein, active-site domain | domain-containing proteinMYCTH_2298243MYCTH_2298245 7715589-7716942 -: Zinc finger, C3HC4 type (RING finger) | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | domain-containing proteinMYCTH_2298245MYCTH_2298246 7717066-7724090 -: Meiotic cell cortex C-terminal pleckstrin homology | domain-containing proteinMYCTH_22982467696 kb7700 kb7704 kb7708 kb7712 kb7716 kbCP003002
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved7698571-7699404 -annotatedMYCTH_2298230Cytochrome c oxidase subunit VIa | domain-containing proteinMYCTH_2298230 covers 100% of it on the same strand
APN2flanking_conserved7700136-7702386 +annotatedMYCTH_2298234DNA-(apurinic or apyrimidinic site) endonuclease 2MYCTH_2298234 covers 100% of it on the same strand
MAT1-1-3core_MAT7703805-7704638 -annotatedMYCTH_2115740HMG (high mobility group) box | domain-containing proteinMYCTH_2115740 covers 100% of it on the same strand
MAT1-1-2core_MAT7705124-7706481 +annotatedMYCTH_2107654Mating type protein 1-1-2 of unknown function | domain-containing proteinMYCTH_2107654 covers 100% of it on the same strand
MAT1-1-1core_MAT7707115-7707935 +annotatedMYCTH_2298236Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinMYCTH_2298236 covers 100% of it on the same strand
SLA2flanking_conserved7710010-7713422 -annotatedMYCTH_2298240I/LWEQ domain | ANTH domain | domain-containing proteinMYCTH_2298240 covers 100% of it on the same strand