TequinumCBS127.97 Trichophyton equinum CBS 127.97

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence medium, DS995742:316061-328526

MATPredictFungiDBCIMG_00407 (core_MAT) DS995742:316061-316699 - identity 24.883CIMG_00407MAT1-2-4 (core_MAT) DS995742:316136-316510 - identity 25.397MAT1-2-4MAT1-2-1 (core_MAT) DS995742:317371-318606 + identity 60.0MAT1-2-1MAT1-1-4 (core_MAT) DS995742:319123-320381 - identity 42.9MAT1-1-4APN2 (flanking_conserved) DS995742:321144-323219 - identity 76.6APN2COX13 (flanking_conserved) DS995742:323497-324152 + identity 68.9COX13SLA2 (flanking_conserved) DS995742:324577-328526 - identity 88.1SLA2TEQG_04865 310434-312427 +: oxidoreductaseTEQG_04865TEQG_04866 312960-314223 +: 40S ribosomal protein S4TEQG_04866TEQG_04867 314514-315385 -: unspecified productTEQG_04867TEQG_04868 315968-316873 -: unspecified productTEQG_04868TEQG_04869 317371-318606 +: HMG domain-containing proteinTEQG_04869TEQG_04870 319123-320381 -: unspecified productTEQG_04870TEQG_04871 321144-323219 -: DNA lyaseTEQG_04871TEQG_04872 323497-324152 +: cytochrome c oxidase subunit VIaTEQG_04872TEQG_08710 324577-328526 -: ANTH domain | I/LWEQ domain | domain-containing proteinTEQG_08710TEQG_04875 329065-331770 -: uncharacterized PH domain-containing proteinTEQG_04875TEQG_04876 332208-332803 -: HHE domain-containing proteinTEQG_04876TEQG_04877 333457-334526 -: unspecified productTEQG_04877312 kb314 kb316 kb318 kb320 kb322 kb324 kb326 kb328 kb330 kb332 kbDS995742
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
CIMG_00407core_MAT316061-316699 -annotatedTEQG_04868unspecified productTEQG_04868 covers 100% of it on the same strand
MAT1-2-4core_MAT316136-316510 -annotatedTEQG_04868unspecified productTEQG_04868 covers 100% of it on the same strand
MAT1-2-1core_MAT317371-318606 +annotatedTEQG_04869HMG domain-containing proteinTEQG_04869 covers 100% of it on the same strand
MAT1-1-4core_MAT319123-320381 -annotatedTEQG_04870unspecified productTEQG_04870 covers 100% of it on the same strand
APN2flanking_conserved321144-323219 -annotatedTEQG_04871DNA lyaseTEQG_04871 covers 100% of it on the same strand
COX13flanking_conserved323497-324152 +annotatedTEQG_04872cytochrome c oxidase subunit VIaTEQG_04872 covers 100% of it on the same strand
SLA2flanking_conserved324577-328526 -annotatedTEQG_08710ANTH domain | I/LWEQ domain | domain-containing proteinTEQG_08710 covers 100% of it on the same strand