TasahiiCBS2479 Trichosporon asahii var. asahii CBS 2479

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Basidiomycota_PR_0: undetermined Basidiomycota:PR, confidence medium, JH977583:542342-548544

MATPredictFungiDBpheromone_receptor (core_MAT) JH977583:542342-545244 - identity 30.1pheromone_receptorcaax_precursor (core_MAT) JH977583:548449-548532 - identity 0.0caax_precursorpheromone_B44 (core_MAT) JH977583:548452-548544 - identity 38.71pheromone_B44A1Q1_01441 536914-539291 +: WD domain, G-beta repeat | domain-containing proteinA1Q1_01441A1Q1_01442 539368-540054 -: unspecified productA1Q1_01442A1Q1_01443 542342-545244 -: cytoplasm proteinA1Q1_01443A1Q1_01444 545461-547847 +: Helicase conserved C-terminal domain | DEAD/DEAH box helicase | DBP10CT (NUC160) domain | domain-containing proteinA1Q1_01444A1Q1_01445 550283-552261 -: ubiquitin carboxyl-terminal hydrolase 6A1Q1_01445A1Q1_01446 552569-554749 -: Lysosomal dipeptide transporter MFSD1A1Q1_01446538 kb540 kb542 kb544 kb546 kb548 kb550 kb552 kbJH977583
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
pheromone_receptorcore_MAT542342-545244 -annotatedA1Q1_01443cytoplasm proteinA1Q1_01443 covers 100% of it on the same strand
caax_precursorcore_MAT548449-548532 -novel—no FungiDB gene overlaps this MATPredict gene
pheromone_B44core_MAT548452-548544 -novel—no FungiDB gene overlaps this MATPredict gene

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
A1Q1_01444545461-547847 +Helicase conserved C-terminal domain | DEAD/DEAH box helicase | DBP10CT (NUC160) domain | domain-containing protein