SludwigiiUTAD17 Saccharomycodes ludwigii UTAD17

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MATsc_0: MATa Ascomycota:MATsc, confidence medium, UFAJ01000036:19669-25533

MATPredictFungiDBMATA2 (core_MAT) UFAJ01000036:19687-19944 - identity 30.233MATA2MATA1 (core_MAT) UFAJ01000036:21890-22149 + identity 43.1MATA1sla2 (flanking_conserved) UFAJ01000036:22336-25533 - identity 48.3sla2SCODWIG_00449 16048-18882 +: Fungal Zn(2)-Cys(6) binuclear cluster domain | domain-containing proteinSCODWIG_00449SCODWIG_00450 22336-25533 -: related to cytoskeleton assembly control protein Sla2SCODWIG_0045016 kb18 kb20 kb22 kb24 kb26 kb28 kb30 kbUFAJ01000036
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MATA2core_MAT19687-19944 -novel—no FungiDB gene overlaps this MATPredict gene
MATA1core_MAT21890-22149 +novel—no FungiDB gene overlaps this MATPredict gene
sla2flanking_conserved22336-25533 -annotatedSCODWIG_00450related to cytoskeleton assembly control protein Sla2SCODWIG_00450 covers 100% of it on the same strand