SchartarumIBT40293 Stachybotrys chartarum IBT 40293

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, KL651303:65469-82569

MATPredictFungiDBSLA2 (flanking_conserved) KL651303:65469-69118 + identity 82.2SLA2MAT1-2-1 (core_MAT) KL651303:77568-78432 + identity 52.9MAT1-2-1APN2 (flanking_conserved) KL651303:79016-81205 - identity 86.4APN2COX13 (flanking_conserved) KL651303:81879-82569 + identity 66.2COX13S40293_06321 60219-61607 +: Pre-mRNA splicing Prp18-interacting factor | domain-containing proteinS40293_06321S40293_06322 61910-62623 -: Ribosomal protein S4/S9 N-terminal domain | S4 domain | domain-containing proteinS40293_06322S40293_06323 63024-63702 +: Ribosomal protein L21e | domain-containing proteinS40293_06323S40293_06324 65469-69118 +: ANTH domain | I/LWEQ domain | domain-containing proteinS40293_06324S40293_11063 74315-76108 -: unspecified productS40293_11063S40293_06325 77568-78432 +: HMG (high mobility group) box | domain-containing proteinS40293_06325S40293_06326 79016-81205 -: DNA-(apurinic or apyrimidinic site) endonuclease 2S40293_06326S40293_06327 81879-82569 +: Cytochrome c oxidase subunit VIa | domain-containing proteinS40293_06327S40293_06328 83259-85728 +: Anaphase-promoting complex subunit 5 | domain-containing proteinS40293_06328S40293_06329 85909-86975 -: Complex I intermediate-associated protein 30 (CIA30) | domain-containing proteinS40293_06329S40293_06330 87020-88158 +: unspecified productS40293_0633064 kb68 kb72 kb76 kb80 kb84 kbKL651303
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved65469-69118 +annotatedS40293_06324ANTH domain | I/LWEQ domain | domain-containing proteinS40293_06324 covers 100% of it on the same strand
MAT1-2-1core_MAT77568-78432 +annotatedS40293_06325HMG (high mobility group) box | domain-containing proteinS40293_06325 covers 100% of it on the same strand
APN2flanking_conserved79016-81205 -annotatedS40293_06326DNA-(apurinic or apyrimidinic site) endonuclease 2S40293_06326 covers 100% of it on the same strand
COX13flanking_conserved81879-82569 +annotatedS40293_06327Cytochrome c oxidase subunit VIa | domain-containing proteinS40293_06327 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
S40293_1106374315-76108 -unspecified product