SapiospermumIHEM14462 Scedosporium apiospermum IHEM 14462

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, JOWA01000098:255946-287552

MATPredictFungiDBSLA2 (flanking_conserved) JOWA01000098:255946-259530 + identity 81.6SLA2MAT1-1-1 (core_MAT) JOWA01000098:262491-263529 - identity 45.7MAT1-1-1COX13 (flanking_conserved) JOWA01000098:278738-279517 - identity 73.7COX13MAT1-2-1 (core_MAT) JOWA01000098:287445-287552 - identity 33.333MAT1-2-1SAPIO_CDS5240 251010-255089 +: Pigment biosynthesis cluster protein PigL N-terminal | domain-containing proteinSAPIO_CDS5240SAPIO_CDS5241 255946-259530 +: Endocytosis protein end4SAPIO_CDS5241SAPIO_CDS5242 262491-263529 -: Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinSAPIO_CDS5242SAPIO_CDS5243 266179-267846 +: unspecified productSAPIO_CDS5243SAPIO_CDS5244 268590-270197 -: unspecified productSAPIO_CDS5244SAPIO_CDS5245 277354-278025 +: hypothetical proteinSAPIO_CDS5245SAPIO_CDS5246 278738-279517 -: Cytochrome c oxidase subunit VIa | domain-containing proteinSAPIO_CDS5246SAPIO_CDS5247 280207-280854 +: unspecified productSAPIO_CDS5247SAPIO_CDS5248 281033-281677 -: Double-stranded DNA-binding domain | domain-containing proteinSAPIO_CDS5248SAPIO_CDS5249 286461-288263 +: unspecified productSAPIO_CDS5249SAPIO_CDS5250 289691-291594 +: Major facilitator superfamily transporterSAPIO_CDS5250252 kb256 kb260 kb264 kb268 kb272 kb276 kb280 kb284 kb288 kb292 kbJOWA01000098
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved255946-259530 +annotatedSAPIO_CDS5241Endocytosis protein end4SAPIO_CDS5241 covers 100% of it on the same strand
MAT1-1-1core_MAT262491-263529 -annotatedSAPIO_CDS5242Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinSAPIO_CDS5242 covers 100% of it on the same strand
COX13flanking_conserved278738-279517 -annotatedSAPIO_CDS5246Cytochrome c oxidase subunit VIa | domain-containing proteinSAPIO_CDS5246 covers 100% of it on the same strand
MAT1-2-1core_MAT287445-287552 -partialSAPIO_CDS5249unspecified productSAPIO_CDS5249 overlaps 100% but on the opposite strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
SAPIO_CDS5243266179-267846 +unspecified product
SAPIO_CDS5244268590-270197 -unspecified product
SAPIO_CDS5245277354-278025 +hypothetical protein
SAPIO_CDS5247280207-280854 +unspecified product
SAPIO_CDS5248281033-281677 -Double-stranded DNA-binding domain | domain-containing protein
SAPIO_CDS5249286461-288263 +unspecified product