RmackenzieiCBS650.93 Rhinocladiella mackenziei CBS 650.93

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, KN847478:2442225-2452859

MATPredictFungiDBSLA2 (flanking_conserved) KN847478:2442225-2445491 + identity 83.6SLA2MAT1-1-1 (core_MAT) KN847478:2448348-2449242 - identity 34.8MAT1-1-1APN2 (flanking_conserved) KN847478:2450980-2452859 - identity 95.5APN2Z518_06022 2437973-2439224 -: unspecified productZ518_06022Z518_06023 2442225-2445491 +: ANTH domain | I/LWEQ domain | domain-containing proteinZ518_06023Z518_06024 2448348-2449242 -: Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinZ518_06024Z518_06025 2450980-2452859 -: exodeoxyribonuclease IIIZ518_06025Z518_06026 2453516-2463097 +: Intermembrane lipid transfer protein VPS13, C-terminal | VPS13-like family middle region | VPS13-like family N-terminal region | Vacuolar-sorting associated protein 13, adaptor binding domain | domain-containing proteinZ518_060262438 kb2440 kb2442 kb2444 kb2446 kb2448 kb2450 kb2452 kb2454 kb2456 kbKN847478
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved2442225-2445491 +annotatedZ518_06023ANTH domain | I/LWEQ domain | domain-containing proteinZ518_06023 covers 100% of it on the same strand
MAT1-1-1core_MAT2448348-2449242 -annotatedZ518_06024Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinZ518_06024 covers 100% of it on the same strand
APN2flanking_conserved2450980-2452859 -annotatedZ518_06025exodeoxyribonuclease IIIZ518_06025 covers 100% of it on the same strand