Pwakefieldiae2A Pneumocystis wakefieldiae 2A
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Ascomycota_PM_0: P Ascomycota:PM, confidence medium, CP054543:71161-81241
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| matPi | core_MAT | 71161-71925 - | annotated | MERGE_000830 | Homeobox KN domain | domain-containing protein | MERGE_000830 covers 100% of it on the same strand |
| matMc | core_MAT | 79975-81241 - | annotated | MERGE_000832 | HMG (high mobility group) box | domain-containing protein | MERGE_000832 covers 100% of it on the same strand |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| MERGE_000831 | 72029-79513 + | C-terminal, D2-small domain, of ClpB protein | ATPase family associated with various cellular activities (AAA) | Clp amino terminal domain, pathogenicity island component | AAA domain (Cdc48 subfamily) | AAA lid domain | ANTH domain | I/LWEQ domain | domain-containing protein |