PvariotiiCBS101075 Paecilomyces variotii CBS 101075

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence medium, RCNU01000001:171426-185162

MATPredictFungiDBCOX13 (flanking_conserved) RCNU01000001:171426-172234 - identity 77.1COX13APN2 (flanking_conserved) RCNU01000001:172386-174796 + identity 84.1APN2MAT1-1-4 (core_MAT) RCNU01000001:177813-178196 - identity 26.515MAT1-1-4MAT1-1-1 (core_MAT) RCNU01000001:179024-180176 + identity 46.7MAT1-1-1SLA2 (flanking_conserved) RCNU01000001:181217-185162 - identity 90.8SLA2C8Q69DRAFT_448987 165879-167270 -: phosphoribosyl-aminoimidazole-succinocarboxamide synthaseC8Q69DRAFT_448987C8Q69DRAFT_2402 167384-170593 +: putative anaphase-promoting complex subunit Apc5C8Q69DRAFT_2402C8Q69DRAFT_448989 171032-172343 -: cytochrome c oxidase, subunit VIaC8Q69DRAFT_448989C8Q69DRAFT_489326 172344-175332 +: DNA-(apurinic or apyrimidinic site) endonuclease 2C8Q69DRAFT_489326C8Q69DRAFT_449005 176296-177242 -: XM_028629333.1C8Q69DRAFT_449005C8Q69DRAFT_511399 176908-178546 -: XM_028633264.1C8Q69DRAFT_511399C8Q69DRAFT_439990 MAT1-1-1 179024-180176 +: MAT1-1-1C8Q69DRAFT_439990 MAT1-1-1C8Q69DRAFT_449012 180765-185366 -: putative endocytosis protein end4C8Q69DRAFT_449012C8Q69DRAFT_449014 185489-188656 -: PH domain-containing proteinC8Q69DRAFT_449014C8Q69DRAFT_449015 188765-190765 -: putative transcription factor Rba50C8Q69DRAFT_449015168 kb170 kb172 kb174 kb176 kb178 kb180 kb182 kb184 kb186 kb188 kb190 kbRCNU01000001
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved171426-172234 -annotatedC8Q69DRAFT_448989cytochrome c oxidase, subunit VIaC8Q69DRAFT_448989 covers 100% of it on the same strand
APN2flanking_conserved172386-174796 +annotatedC8Q69DRAFT_489326DNA-(apurinic or apyrimidinic site) endonuclease 2C8Q69DRAFT_489326 covers 100% of it on the same strand
MAT1-1-4core_MAT177813-178196 -annotatedC8Q69DRAFT_511399XM_028633264.1C8Q69DRAFT_511399 covers 100% of it on the same strand
MAT1-1-1core_MAT179024-180176 +annotatedC8Q69DRAFT_439990 MAT1-1-1MAT1-1-1C8Q69DRAFT_439990 covers 100% of it on the same strand
SLA2flanking_conserved181217-185162 -annotatedC8Q69DRAFT_449012putative endocytosis protein end4C8Q69DRAFT_449012 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
C8Q69DRAFT_449005176296-177242 -XM_028629333.1