Pstriiformis93-210 Puccinia striiformis strain 93-210

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Basidiomycota_rustHD_0: undetermined Basidiomycota:rustHD, confidence high, PKSL01000053:77397-81261

MATPredictFungiDBbW (core_MAT) PKSL01000053:77397-79584 - identity 66.4bWbE (core_MAT) PKSL01000053:79845-81261 + identity 72.5bEPSTT_06648 72797-73622 -: unspecified productPSTT_06648PSTT_06649 74161-75663 +: SET domain | domain-containing proteinPSTT_06649PSTT_06650 77397-79584 -: Homeobox KN domain | domain-containing proteinPSTT_06650PSTT_06651 79845-81261 +: Homeodomain | domain-containing proteinPSTT_0665174 kb76 kb78 kb80 kb82 kb84 kb86 kbPKSL01000053
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
bWcore_MAT77397-79584 -annotatedPSTT_06650Homeobox KN domain | domain-containing proteinPSTT_06650 covers 100% of it on the same strand
bEcore_MAT79845-81261 +annotatedPSTT_06651Homeodomain | domain-containing proteinPSTT_06651 covers 100% of it on the same strand

Basidiomycota_rustHD_1: undetermined Basidiomycota:rustHD, confidence high, PKSL01000113:20528-24466

MATPredictFungiDBbE (core_MAT) PKSL01000113:20528-21971 - identity 75.6bEbW (core_MAT) PKSL01000113:22589-24466 + identity 85.7bWPSTT_10472 20528-21971 -: Homeodomain | domain-containing proteinPSTT_10472PSTT_10473 22589-24466 +: Homeobox KN domain | domain-containing proteinPSTT_10473PSTT_10474 26189-28076 -: SET domain | domain-containing proteinPSTT_10474PSTT_10475 28228-29058 +: unspecified productPSTT_1047516 kb18 kb20 kb22 kb24 kb26 kb28 kbPKSL01000113
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
bEcore_MAT20528-21971 -annotatedPSTT_10472Homeodomain | domain-containing proteinPSTT_10472 covers 100% of it on the same strand
bWcore_MAT22589-24466 +annotatedPSTT_10473Homeobox KN domain | domain-containing proteinPSTT_10473 covers 100% of it on the same strand