PomphalodesCBS100304 Pyronema omphalodes CBS 100304
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Ascomycota_MATtub_0: MAT1-2 Ascomycota:MATtub, confidence medium, JAJJXM010000056:335693-348245
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| MAT1-2-1 | core_MAT | 335693-336672 - | annotated | BZA77DRAFT_323747 | high mobility group box domain-containing protein | BZA77DRAFT_323747 covers 100% of it on the same strand |
| APN2 | flanking_conserved | 346192-348245 - | annotated | BZA77DRAFT_286141 | Endonuclease/exonuclease/phosphatase | BZA77DRAFT_286141 covers 100% of it on the same strand |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| BZA77DRAFT_323753 | 338981-340554 + | phospholipase A2 |
| BZA77DRAFT_137471 | 343313-344498 + | P-loop containing nucleoside triphosphate hydrolase protein |
| BZA77DRAFT_359064 | 344630-345431 - | RNA recognition motif | domain-containing protein |