PjiroveciiSE8 Pneumocystis jirovecii SE8
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Ascomycota_PM_0: M Ascomycota:PM, confidence high, CAKM01000262:47080-61327
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| matPi | core_MAT | 47080-48131 - | annotated | PNEJI1_000366 | Homeobox KN domain | domain-containing protein | PNEJI1_000366 covers 100% of it on the same strand |
| matMc | core_MAT | 56442-57194 - | novel | — | no FungiDB gene overlaps this MATPredict gene | |
| matMi | core_MAT | 57308-57517 + | novel | — | no FungiDB gene overlaps this MATPredict gene |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| PNEJI1_000367 | 48319-55796 + | AAA domain (Cdc48 subfamily) | Clp amino terminal domain, pathogenicity island component | ATPase family associated with various cellular activities (AAA) | ANTH domain | I/LWEQ domain | AAA lid domain | C-terminal, D2-small domain, of ClpB protein | domain-containing protein |
| PNEJI1_000369 | 59134-59777 + | Homeodomain | domain-containing protein |
| PNEJI1_000370 | 60761-61936 + | HMG (high mobility group) box | domain-containing protein |