Pexpansumd1 Penicillium expansum d1

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, JQFY01000238:137236-148259

MATPredictFungiDBCOX13 (flanking_conserved) JQFY01000238:137236-138029 - identity 78.9COX13APN2 (flanking_conserved) JQFY01000238:138367-140605 + identity 85.7APN2MAT1-1-1 (core_MAT) JQFY01000238:142122-143192 + identity 39.6MAT1-1-1SLA2 (flanking_conserved) JQFY01000238:144393-148259 - identity 89.5SLA2PEXP_003110 129802-133276 -: Ubiquitin-conjugating enzyme, E2PEXP_003110PEXP_003120 134503-136317 +: unspecified productPEXP_003120PEXP_003130 137236-138029 -: Cytochrome c oxidase, subunit VIaPEXP_003130PEXP_003140 138367-140605 +: Endonuclease/exonuclease/phosphatasePEXP_003140PEXP_003150 142122-143192 +: Mating-type protein MAT alpha 1PEXP_003150PEXP_003160 144393-148259 -: Epsin-like, N-terminalPEXP_003160PEXP_003170 148955-151811 -: Pleckstrin homology domain | Maintenance of mitochondrial morphology protein 1 | domain-containing proteinPEXP_003170PEXP_003180 152608-154016 -: Terpenoid synthasePEXP_003180134 kb136 kb138 kb140 kb142 kb144 kb146 kb148 kb150 kb152 kbJQFY01000238
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved137236-138029 -annotatedPEXP_003130Cytochrome c oxidase, subunit VIaPEXP_003130 covers 100% of it on the same strand
APN2flanking_conserved138367-140605 +annotatedPEXP_003140Endonuclease/exonuclease/phosphatasePEXP_003140 covers 100% of it on the same strand
MAT1-1-1core_MAT142122-143192 +annotatedPEXP_003150Mating-type protein MAT alpha 1PEXP_003150 covers 100% of it on the same strand
SLA2flanking_conserved144393-148259 -annotatedPEXP_003160Epsin-like, N-terminalPEXP_003160 covers 100% of it on the same strand