Pdestructans20631-21 Pseudogymnoascus destructans 20631-21

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, GL573182:101497-114844

MATPredictFungiDBCOX13 (flanking_conserved) GL573182:101497-102191 - identity 72.5COX13APN2 (flanking_conserved) GL573182:102490-104727 + identity 88.6APN2MAT1-2-1 (core_MAT) GL573182:106203-107092 - identity 32.9MAT1-2-1MAT1-1-5 (core_MAT) GL573182:107767-107925 + identity 31.667MAT1-1-5MAT1-1-1 (core_MAT) GL573182:109337-110382 + identity 43.8MAT1-1-1SLA2 (flanking_conserved) GL573182:111444-114844 - identity 84.1SLA2GMDG_01204 97220-98094 +: Complex I intermediate-associated protein 30 (CIA30) | domain-containing proteinGMDG_01204GMDG_01205 98595-101371 +: Anaphase-promoting complex subunit 5 | domain-containing proteinGMDG_01205GMDG_01206 101323-102222 -: Cytochrome c oxidase subunit VIa | domain-containing proteinGMDG_01206GMDG_01207 102330-105699 +: DNA-(apurinic or apyrimidinic site) endonuclease 2GMDG_01207GMDG_01208 106203-107092 -: HMG (high mobility group) box | domain-containing proteinGMDG_01208GMDG_01209 109198-110590 +: Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinGMDG_01209GMDG_01210 110244-115043 -: I/LWEQ domain | ANTH domain | domain-containing proteinGMDG_01210GMDG_01211 115080-118751 +: Pleckstrin homology domain | domain-containing proteinGMDG_01211GMDG_01212 118890-124476 -: DNA polymerase zeta catalytic subunit, DNA-directed DNA polymeraseGMDG_0121298 kb100 kb102 kb104 kb106 kb108 kb110 kb112 kb114 kb116 kb118 kbGL573182
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved101497-102191 -annotatedGMDG_01206Cytochrome c oxidase subunit VIa | domain-containing proteinGMDG_01206 covers 100% of it on the same strand
APN2flanking_conserved102490-104727 +annotatedGMDG_01207DNA-(apurinic or apyrimidinic site) endonuclease 2GMDG_01207 covers 100% of it on the same strand
MAT1-2-1core_MAT106203-107092 -annotatedGMDG_01208HMG (high mobility group) box | domain-containing proteinGMDG_01208 covers 100% of it on the same strand
MAT1-1-5core_MAT107767-107925 +novel—no FungiDB gene overlaps this MATPredict gene
MAT1-1-1core_MAT109337-110382 +annotatedGMDG_01209Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinGMDG_01209 covers 100% of it on the same strand
SLA2flanking_conserved111444-114844 -annotatedGMDG_01210I/LWEQ domain | ANTH domain | domain-containing proteinGMDG_01210 covers 100% of it on the same strand