PblakesleeanusNRRL1555 Phycomyces blakesleeanus NRRL 1555(-)

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Mucoromycota_MAT_0: Minus Mucoromycota:MAT, confidence high, KV440971:3978271-3991613

MATPredictFungiDBalgA (flanking_variable) KV440971:3978271-3979861 - identity 48.5algAtptA (flanking_conserved) KV440971:3980891-3983141 - identity 100.0tptAsexM (core_MAT) KV440971:3985605-3986240 + identity 100.0sexMrnhA (flanking_conserved) KV440971:3986572-3991613 + identity 99.8rnhAPHYBLDRAFT_138995 3973374-3977575 -: unspecified productPHYBLDRAFT_138995PHYBLDRAFT_80073 3978197-3979861 -: Alginate lyase | domain-containing proteinPHYBLDRAFT_80073PHYBLDRAFT_184619 3980647-3983141 -: Triose-phosphate Transporter family | domain-containing proteinPHYBLDRAFT_184619PHYBLDRAFT_154054 3985605-3986240 +: HMG (high mobility group) box | domain-containing proteinPHYBLDRAFT_154054PHYBLDRAFT_80075 3986572-3991627 +: ZNFX1 domain | AAA domain | AAA domain | domain-containing proteinPHYBLDRAFT_80075PHYBLDRAFT_71368 3992453-3995011 +: unspecified productPHYBLDRAFT_71368PHYBLDRAFT_178942 3995525-3996364 -: unspecified productPHYBLDRAFT_1789423974 kb3976 kb3978 kb3980 kb3982 kb3984 kb3986 kb3988 kb3990 kb3992 kb3994 kb3996 kbKV440971
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
algAflanking_variable3978271-3979861 -annotatedPHYBLDRAFT_80073Alginate lyase | domain-containing proteinPHYBLDRAFT_80073 covers 100% of it on the same strand
tptAflanking_conserved3980891-3983141 -annotatedPHYBLDRAFT_184619Triose-phosphate Transporter family | domain-containing proteinPHYBLDRAFT_184619 covers 100% of it on the same strand
sexMcore_MAT3985605-3986240 +annotatedPHYBLDRAFT_154054HMG (high mobility group) box | domain-containing proteinPHYBLDRAFT_154054 covers 100% of it on the same strand
rnhAflanking_conserved3986572-3991613 +annotatedPHYBLDRAFT_80075ZNFX1 domain | AAA domain | AAA domain | domain-containing proteinPHYBLDRAFT_80075 covers 100% of it on the same strand