MpachydermatisCBS1879 Malassezia pachydermatis CBS 1879 Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
Basidiomycota_aLocus_0: undetermined Basidiomycota:aLocus, confidence high, LGAV01000001:1018608-1020377 MATPredict FungiDB mfa1 (core_MAT) LGAV01000001:1018608-1018757 - identity 50.0 mfa1 pra1 (core_MAT) LGAV01000001:1019422-1020377 + identity 26.0 pra1 Malapachy_3469 1012502-1015600 +: cdc24-gtp gdp exchange factor for cdc42p Malapachy_3469 Malapachy_3460 1015923-1016933 -: glyceraldehyde-3-phosphate dehydrogenase Malapachy_3460 Malapachy_3462 1017160-1018047 -: 3' exoribonuclease family, domain 2 | 3' exoribonuclease family, domain 1 | domain-containing protein Malapachy_3462 Malapachy_3468 1019422-1020377 +: pheromone receptor a1 Malapachy_3468 Malapachy_3453 1020500-1021679 -: 26s proteasome regulatory subunit rpn10 Malapachy_3453 Malapachy_3426 1021860-1022830 +: ccr4-not transcription subunit 7 Malapachy_3426 Malapachy_3465 1022919-1023436 -: ubiquitin-conjugating enzyme e2 Malapachy_3465 Malapachy_3456 1023784-1026132 -: translation initiation factor if-2 Malapachy_3456 1014 kb 1015 kb 1016 kb 1017 kb 1018 kb 1019 kb 1020 kb 1021 kb 1022 kb 1023 kb 1024 kb 1025 kb LGAV01000001 MATPredict gene Role Coordinates Verdict FungiDB gene FungiDB product Why mfa1 core_MAT 1018608-1018757 - novel — no FungiDB gene overlaps this MATPredict gene pra1 core_MAT 1019422-1020377 + annotated Malapachy_3468 pheromone receptor a1 Malapachy_3468 covers 100% of it on the same strand
Basidiomycota_bLocus_1: undetermined Basidiomycota:bLocus, confidence high, LGAV01000004:366673-372093 MATPredict FungiDB bW (core_MAT) LGAV01000004:366673-369885 - identity 78.4 bW bE (core_MAT) LGAV01000004:371524-372093 + identity 44.2 bE Malapachy_3893 360985-365463 +: p-loop containing nucleoside triphosphate hydrolase protein Malapachy_3893 Malapachy_3903 365468-366484 -: Aldo/keto reductase family | domain-containing protein Malapachy_3903 Malapachy_3924 366673-369885 -: high-affinity methionine permease Malapachy_3924 Malapachy_3918 370563-371465 +: homeodomain transcription factor be Malapachy_3918 Malapachy_3919 371524-372093 +: Sas10/Utp3/C1D family | domain-containing protein Malapachy_3919 Malapachy_3909 372244-373995 +: unspecified product Malapachy_3909 Malapachy_3910 374108-375941 +: ptm1-member of the major facilitator superfamily Malapachy_3910 362 kb 364 kb 366 kb 368 kb 370 kb 372 kb 374 kb 376 kb LGAV01000004 MATPredict gene Role Coordinates Verdict FungiDB gene FungiDB product Why bW core_MAT 366673-369885 - annotated Malapachy_3924 high-affinity methionine permease Malapachy_3924 covers 100% of it on the same strand bE core_MAT 371524-372093 + annotated Malapachy_3919 Sas10/Utp3/C1D family | domain-containing protein Malapachy_3919 covers 100% of it on the same strand
FungiDB genes inside the locus span that MATPredict did not model:
FungiDB gene Coordinates Product Malapachy_3918 370563-371465 + homeodomain transcription factor be