MhybridumARSEF549 Metarhizium hybridum ARSEF 549

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence medium, AZNF01000002:2798468-2828979

MATPredictFungiDBSLA2 (flanking_conserved) AZNF01000002:2807218-2811564 + identity 80.3SLA2MAT1-1-1 (core_MAT) AZNF01000002:2819478-2820608 - identity 44.5MAT1-1-1MAT1-1-2 (core_MAT) AZNF01000002:2822131-2823180 - identity 28.5MAT1-1-2MAT1-1-3 (core_MAT) AZNF01000002:2823484-2824177 + identity 46.4MAT1-1-3APN2 (flanking_conserved) AZNF01000002:2825541-2827591 - identity 75.0APN2COX13 (flanking_conserved) AZNF01000002:2828248-2828979 + identity 66.2COX13MAN_02382 2792515-2795612 +: Pleckstrin homology domain | Maintenance of mitochondrial morphology protein 1 | domain-containing proteinMAN_02382MAN_02383 2796152-2801303 -: DNA polymerase family BMAN_02383MAN_02384 2802004-2803383 +: pre-mRNA-splicing factor slu7MAN_02384MAN_02385 2803718-2804434 -: RNA-binding S4MAN_02385MAN_02386 2804834-2805564 +: Ribosomal protein L21e | domain-containing proteinMAN_02386MAN_02387 2807218-2811564 +: cytoskeleton assembly control protein Sla2MAN_02387MAN_02388 2819478-2820608 -: mating-type A-1 proteinMAN_02388MAN_10891 2822131-2823180 -: mat1-1-2MAN_10891MAN_02389 2823484-2824177 +: MAT1-1-3 like proteinMAN_02389MAN_02390 2825541-2827591 -: DNA lyaseMAN_02390MAN_02391 2828248-2828979 +: Cytochrome c oxidase, subunit VIaMAN_02391MAN_02392 2829706-2832180 +: anaphase-promoting complex proteinMAN_02392MAN_02393 2832442-2833290 -: Complex I intermediate-associated protein 30MAN_02393MAN_02394 2833785-2834808 +: Tim44-like domain | domain-containing proteinMAN_023942796 kb2800 kb2804 kb2808 kb2812 kb2816 kb2820 kb2824 kb2828 kb2832 kbAZNF01000002
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved2807218-2811564 +annotatedMAN_02387cytoskeleton assembly control protein Sla2MAN_02387 covers 100% of it on the same strand
MAT1-1-1core_MAT2819478-2820608 -annotatedMAN_02388mating-type A-1 proteinMAN_02388 covers 100% of it on the same strand
MAT1-1-2core_MAT2822131-2823180 -annotatedMAN_10891mat1-1-2MAN_10891 covers 100% of it on the same strand
MAT1-1-3core_MAT2823484-2824177 +annotatedMAN_02389MAT1-1-3 like proteinMAN_02389 covers 100% of it on the same strand
APN2flanking_conserved2825541-2827591 -annotatedMAN_02390DNA lyaseMAN_02390 covers 100% of it on the same strand
COX13flanking_conserved2828248-2828979 +annotatedMAN_02391Cytochrome c oxidase, subunit VIaMAN_02391 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
MAN_023832796152-2801303 -DNA polymerase family B
MAN_023842802004-2803383 +pre-mRNA-splicing factor slu7
MAN_023852803718-2804434 -RNA-binding S4
MAN_023862804834-2805564 +Ribosomal protein L21e | domain-containing protein