MacridumCQMa102 Metarhizium acridum CQMa 102

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, GL698509:57589-79908

MATPredictFungiDBCOX13 (flanking_conserved) GL698509:57589-58327 - identity 65.6COX13APN2 (flanking_conserved) GL698509:58803-61038 + identity 86.4APN2MAT1-2-1 (core_MAT) GL698509:62629-63471 - identity 66.7MAT1-2-1SLA2 (flanking_conserved) GL698509:75015-79908 - identity 79.0SLA2MAC_05345 51751-52772 -: unspecified productMAC_05345MAC_05346 53255-54111 +: Complex I intermediate-associated protein 30MAC_05346MAC_05347 54351-56821 -: anaphase-promoting complex proteinMAC_05347MAC_05348 57589-58327 -: cytochrome c oxidase subunit VIa, putativeMAC_05348MAC_05349 58803-61038 +: DNA lyaseMAC_05349MAC_05350 62629-63471 -: MAT1-2-1 like proteinMAC_05350MAC_05351 66048-66837 +: unspecified productMAC_05351MAC_05352 73483-74510 -: WD domain, G-beta repeat containing proteinMAC_05352MAC_05353 75015-79908 -: ANTH domain proteinMAC_05353MAC_05354 81720-82449 -: 60S ribosomal protein L21MAC_05354MAC_05355 82844-83560 +: 40S ribosomal protein S9MAC_05355MAC_05356 83903-85291 -: pre-mRNA-splicing factor slu7MAC_0535656 kb60 kb64 kb68 kb72 kb76 kb80 kb84 kbGL698509
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved57589-58327 -annotatedMAC_05348cytochrome c oxidase subunit VIa, putativeMAC_05348 covers 100% of it on the same strand
APN2flanking_conserved58803-61038 +annotatedMAC_05349DNA lyaseMAC_05349 covers 100% of it on the same strand
MAT1-2-1core_MAT62629-63471 -annotatedMAC_05350MAT1-2-1 like proteinMAC_05350 covers 100% of it on the same strand
SLA2flanking_conserved75015-79908 -annotatedMAC_05353ANTH domain proteinMAC_05353 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
MAC_0535166048-66837 +unspecified product
MAC_0535273483-74510 -WD domain, G-beta repeat containing protein