KlactisNRRLY-1140 Kluyveromyces lactis NRRL Y-1140

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MATsc_0: MATa Ascomycota:MATsc, confidence high, CR382122:1278225-1280936

MATPredictFungiDBsla2 (flanking_conserved) CR382122:1278225-1278557 + identity 100.0sla2MATA1 (core_MAT) CR382122:1278622-1279308 - identity 100.0MATA1MATA2 (core_MAT) CR382122:1280163-1280936 + identity 100.0MATA2KLLA0_B14498g 1275022-1277322 +: Hyphally regulated cell wall protein N-terminal | domain-containing proteinKLLA0_B14498gKLLA0_B14531g 1278225-1278557 +: unspecified productKLLA0_B14531gKLLA0_B14553g 1278622-1279308 -: Homeodomain | domain-containing proteinKLLA0_B14553gKLLA0_B14575g 1280163-1280936 +: unspecified productKLLA0_B14575gKLLA0_B14597g 1281354-1281677 -: unspecified productKLLA0_B14597gKLLA0_B14619g 1284933-1286528 -: Flavin-binding monooxygenase-like | domain-containing proteinKLLA0_B14619g1274 kb1276 kb1278 kb1280 kb1282 kb1284 kbCR382122
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
sla2flanking_conserved1278225-1278557 +annotatedKLLA0_B14531gunspecified productKLLA0_B14531g covers 100% of it on the same strand
MATA1core_MAT1278622-1279308 -annotatedKLLA0_B14553gHomeodomain | domain-containing proteinKLLA0_B14553g covers 100% of it on the same strand
MATA2core_MAT1280163-1280936 +annotatedKLLA0_B14575gunspecified productKLLA0_B14575g covers 100% of it on the same strand

Ascomycota_MATsc_1: MATalpha Ascomycota:MATsc, confidence high, CR382123:23718-25803

MATPredictFungiDBsla2 (flanking_conserved) CR382123:23718-24050 + identity 100.0sla2MATALPHA1 (core_MAT) CR382123:24124-24909 - identity 100.0MATALPHA1MATALPHA2 (core_MAT) CR382123:25132-25803 + identity 100.0MATALPHA2KLLA0_C00286g 19668-21206 +: Luciferase-like monooxygenase | domain-containing proteinKLLA0_C00286gKLLA0_C00308t 22894-23276 +: unspecified productKLLA0_C00308tKLLA0_C00330g 23718-24050 +: unspecified productKLLA0_C00330gKLLA0_C00352g 24124-24909 -: Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinKLLA0_C00352gKLLA0_C00374g 25132-25803 +: Homeobox KN domain | domain-containing proteinKLLA0_C00374gKLLA0_C00396g 26146-28839 -: unspecified productKLLA0_C00396gKLLA0_C00418t 29960-30363 +: unspecified productKLLA0_C00418t20 kb22 kb24 kb26 kb28 kb30 kbCR382123
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
sla2flanking_conserved23718-24050 +annotatedKLLA0_C00330gunspecified productKLLA0_C00330g covers 100% of it on the same strand
MATALPHA1core_MAT24124-24909 -annotatedKLLA0_C00352gMating-type protein MAT alpha 1 HMG-box | domain-containing proteinKLLA0_C00352g covers 100% of it on the same strand
MATALPHA2core_MAT25132-25803 +annotatedKLLA0_C00374gHomeobox KN domain | domain-containing proteinKLLA0_C00374g covers 100% of it on the same strand

Ascomycota_MATsc_2: MATa Ascomycota:MATsc, confidence high, CR382123:277789-282183

MATPredictFungiDBsla2 (flanking_conserved) CR382123:277789-279804 + identity 100.0sla2MATA1 (core_MAT) CR382123:279869-280555 - identity 100.0MATA1MATA2 (core_MAT) CR382123:281410-282183 + identity 100.0MATA2KLLA0_C03025g 271793-274093 +: cysteine-tRNA ligaseKLLA0_C03025gKLLA0_C03047g 274325-275247 +: unspecified productKLLA0_C03047gKLLA0_C03069g 275322-275942 -: Pre-mRNA-splicing factor CWC25KLLA0_C03069gKLLA0_C03091g 276491-276817 -: Translation initiation factor SUI1 | domain-containing proteinKLLA0_C03091gKLLA0_C03113g 277789-279804 +: ANTH domain | domain-containing proteinKLLA0_C03113gKLLA0_C03135g 279869-280555 -: Homeodomain | domain-containing proteinKLLA0_C03135gKLLA0_C03157g 281410-282183 +: unspecified productKLLA0_C03157gKLLA0_C03179g 282251-286687 -: Laa1/Sip1/HEATR5 HEAT repeat region | domain-containing proteinKLLA0_C03179gKLLA0_C03201g 286973-288925 -: Fungal specific transcription factor domain | Fungal Zn(2)-Cys(6) binuclear cluster domain | domain-containing proteinKLLA0_C03201g274 kb276 kb278 kb280 kb282 kb284 kb286 kbCR382123
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
sla2flanking_conserved277789-279804 +annotatedKLLA0_C03113gANTH domain | domain-containing proteinKLLA0_C03113g covers 100% of it on the same strand
MATA1core_MAT279869-280555 -annotatedKLLA0_C03135gHomeodomain | domain-containing proteinKLLA0_C03135g covers 100% of it on the same strand
MATA2core_MAT281410-282183 +annotatedKLLA0_C03157gunspecified productKLLA0_C03157g covers 100% of it on the same strand