KdejecticolaCBS10117 Kwoniella dejecticola CBS 10117
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Basidiomycota_MAT_0: alpha Basidiomycota:MAT, confidence medium, KI894028:1906348-1966863
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| RPL39 | core_MAT | 1906348-1906796 + | novel | — | no FungiDB gene overlaps this MATPredict gene | |
| STE3 | core_MAT | 1924352-1925662 - | annotated | I303_02159 | Pheromone A receptor | domain-containing protein | I303_02159 covers 100% of it on the same strand |
| MFalpha | core_MAT | 1934455-1934571 - | novel | — | no FungiDB gene overlaps this MATPredict gene | |
| PAN6 | flanking_conserved | 1965068-1966863 - | annotated | I303_02171 | pantoate-beta-alanine ligase | I303_02171 covers 100% of it on the same strand |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| I303_02154 | 1907598-1908665 - | hypothetical protein |
| I303_02155 | 1909268-1911236 - | BTB/POZ domain | domain-containing protein |
| I303_02156 | 1911456-1916481 - | STE/STE20/PAKA protein kinase |
| I303_02157 | 1916810-1921289 - | MUN domain | C2 domain | domain-containing protein |
| I303_02158 | 1921741-1924258 + | E1-like protein-activating enzyme Gsa7p/Apg7p |
| I303_02160 | 1926295-1929494 + | Zinc finger, C2H2 type | STE like transcription factor | domain-containing protein |
| I303_02161 | 1929707-1931105 - | pre-60S factor REI1 |
| I303_02162 | 1931536-1934132 + | Helicase conserved C-terminal domain | DBP10CT (NUC160) domain | DEAD/DEAH box helicase | domain-containing protein |
| I303_02163 | 1935661-1938481 - | ubiquitinyl hydrolase 1 |
| I303_02164 | 1938845-1940177 - | RNA recognition motif | domain-containing protein |
| I303_02165 | 1941059-1948040 + | chitin synthase |
| I303_02166 | 1949112-1950788 - | Maintenance of mitochondrial morphology protein 1 | domain-containing protein |
| I303_02167 | 1952927-1955778 + | hypothetical protein |
| I303_02168 | 1956674-1957296 - | Heat shock protein 9/12 | domain-containing protein |
| I303_02169 | 1958814-1961471 - | hypothetical protein |
| I303_02170 | 1961816-1964699 + | ATPase |