HvastatrixRaceXXXIII Hemileia vastatrix Race XXXIII

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Basidiomycota_rustHD_0: undetermined Basidiomycota:rustHD, confidence high, PHNK01003389:650-4914

MATPredictFungiDBbE (core_MAT) PHNK01003389:1104-2771 - identity 100.0bEbW (core_MAT) PHNK01003389:3323-4914 + identity 99.18bW-4 kb-2 kb0 kb2 kb4 kb6 kb8 kbPHNK01003389
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
bEcore_MAT1104-2771 -novel—no FungiDB gene overlaps this MATPredict gene
bWcore_MAT3323-4914 +novel—no FungiDB gene overlaps this MATPredict gene

Basidiomycota_rustHD_1: undetermined Basidiomycota:rustHD, confidence high, PHNK01001394:5755-9597

MATPredictFungiDBbW (core_MAT) PHNK01001394:6194-7342 - identity 69.87bWbE (core_MAT) PHNK01001394:7889-9594 + identity 63.17bE2 kb4 kb6 kb8 kb10 kb12 kb14 kbPHNK01001394
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
bWcore_MAT6194-7342 -novel—no FungiDB gene overlaps this MATPredict gene
bEcore_MAT7889-9594 +novel—no FungiDB gene overlaps this MATPredict gene