HcapsulatumWU24 Histoplasma capsulatum WU24

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, CP069109:3438745-3455700

MATPredictFungiDBSLA2 (flanking_conserved) CP069109:3438745-3441862 + identity 90.7SLA2MAT1-1-1 (core_MAT) CP069109:3445335-3446503 - identity 42.1MAT1-1-1MAT1-1-4 (core_MAT) CP069109:3447239-3448754 - identity 44.3MAT1-1-4COX13 (flanking_conserved) CP069109:3451569-3452276 - identity 70.3COX13APN2 (flanking_conserved) CP069109:3452642-3455700 + identity 84.1APN2I7I51_08380 3434979-3436502 +: putative PH domain-containing proteinI7I51_08380I7I51_08381 SLA2 3438745-3441862 +: cytoskeleton assembly control proteinI7I51_08381 SLA2I7I51_08382 MAT1-1 3445335-3446503 -: alpha-box mating type protein of the mating-type locus, mycelia-enriched transcriptI7I51_08382 MAT1-1I7I51_08383 3447239-3448754 -: unspecified productI7I51_08383I7I51_08384 3450720-3451027 +: unspecified productI7I51_08384I7I51_08385 3451569-3452276 -: cytochrome c oxidase subunit VIaI7I51_08385I7I51_08386 APN2 3452642-3455700 +: DNA lyase Apn2I7I51_08386 APN2I7I51_08387 3457565-3462677 +: SRB8 ARM-like domain | Transcription mediator complex subunit Med12 | domain-containing proteinI7I51_083873436 kb3440 kb3444 kb3448 kb3452 kb3456 kb3460 kbCP069109
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved3438745-3441862 +annotatedI7I51_08381 SLA2cytoskeleton assembly control proteinI7I51_08381 covers 100% of it on the same strand
MAT1-1-1core_MAT3445335-3446503 -annotatedI7I51_08382 MAT1-1alpha-box mating type protein of the mating-type locus, mycelia-enriched transcriptI7I51_08382 covers 100% of it on the same strand
MAT1-1-4core_MAT3447239-3448754 -annotatedI7I51_08383unspecified productI7I51_08383 covers 100% of it on the same strand
COX13flanking_conserved3451569-3452276 -annotatedI7I51_08385cytochrome c oxidase subunit VIaI7I51_08385 covers 100% of it on the same strand
APN2flanking_conserved3452642-3455700 +annotatedI7I51_08386 APN2DNA lyase Apn2I7I51_08386 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
I7I51_083843450720-3451027 +unspecified product