Fvanettenii77134 Fusarium vanettenii 77-13-4

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, GG698897:2930981-2950240

MATPredictFungiDBCOX13 (flanking_conserved) GG698897:2930981-2931741 - identity 69.0COX13APN2 (flanking_conserved) GG698897:2932270-2934801 + identity 86.0APN2MAT1-1-3 (core_MAT) GG698897:2935674-2936283 - identity 39.4MAT1-1-3MAT1-1-2 (core_MAT) GG698897:2936734-2938233 + identity 33.2MAT1-1-2MAT1-1-1 (core_MAT) GG698897:2938906-2939627 + identity 46.0MAT1-1-1SLA2 (flanking_conserved) GG698897:2946790-2950240 - identity 81.0SLA2NECHADRAFT_103861 2926189-2927334 +: Complex I intermediate-associated protein 30 (CIA30) | domain-containing proteinNECHADRAFT_103861NECHADRAFT_92127 2927808-2930265 -: Anaphase-promoting complex subunit 5 | domain-containing proteinNECHADRAFT_92127NECHADRAFT_99757 2930877-2931770 -: Cytochrome c oxidase subunit VIa | domain-containing proteinNECHADRAFT_99757NECHADRAFT_78136 2932270-2934801 +: Endonuclease/Exonuclease/phosphatase family | domain-containing proteinNECHADRAFT_78136NECHADRAFT_19608 2935674-2936283 -: HMG (high mobility group) box | domain-containing proteinNECHADRAFT_19608NECHADRAFT_78138 2936734-2938233 +: Mating type protein 1-1-2 of unknown function | domain-containing proteinNECHADRAFT_78138NECHADRAFT_17696 2938906-2939627 +: Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinNECHADRAFT_17696NECHADRAFT_78140 2943129-2943491 -: unspecified productNECHADRAFT_78140NECHADRAFT_78141 2944196-2945323 +: unspecified productNECHADRAFT_78141NECHADRAFT_99759 2946790-2950240 -: ANTH domain | I/LWEQ domain | domain-containing proteinNECHADRAFT_99759NECHADRAFT_67666 2951606-2952608 -: Ribosomal protein L21e | domain-containing proteinNECHADRAFT_67666NECHADRAFT_67668 2952871-2953875 +: S4 domain | Ribosomal protein S4/S9 N-terminal domain | domain-containing proteinNECHADRAFT_67668NECHADRAFT_78145 2953974-2955356 -: Pre-mRNA splicing Prp18-interacting factor | domain-containing proteinNECHADRAFT_781452928 kb2932 kb2936 kb2940 kb2944 kb2948 kb2952 kbGG698897
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved2930981-2931741 -annotatedNECHADRAFT_99757Cytochrome c oxidase subunit VIa | domain-containing proteinNECHADRAFT_99757 covers 100% of it on the same strand
APN2flanking_conserved2932270-2934801 +annotatedNECHADRAFT_78136Endonuclease/Exonuclease/phosphatase family | domain-containing proteinNECHADRAFT_78136 covers 100% of it on the same strand
MAT1-1-3core_MAT2935674-2936283 -annotatedNECHADRAFT_19608HMG (high mobility group) box | domain-containing proteinNECHADRAFT_19608 covers 100% of it on the same strand
MAT1-1-2core_MAT2936734-2938233 +annotatedNECHADRAFT_78138Mating type protein 1-1-2 of unknown function | domain-containing proteinNECHADRAFT_78138 covers 100% of it on the same strand
MAT1-1-1core_MAT2938906-2939627 +annotatedNECHADRAFT_17696Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinNECHADRAFT_17696 covers 100% of it on the same strand
SLA2flanking_conserved2946790-2950240 -annotatedNECHADRAFT_99759ANTH domain | I/LWEQ domain | domain-containing proteinNECHADRAFT_99759 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
NECHADRAFT_781402943129-2943491 -unspecified product
NECHADRAFT_781412944196-2945323 +unspecified product