FnapiformeNRRL25196 Fusarium napiforme NRRL 25196

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, JAAOAO010000075:15125-28498

MATPredictFungiDBSLA2 (flanking_conserved) JAAOAO010000075:15125-18711 + identity 81.6SLA2MAT1-2-1 (core_MAT) JAAOAO010000075:23662-24436 + identity 91.0MAT1-2-1APN2 (flanking_conserved) JAAOAO010000075:25204-27219 - identity 86.4APN2COX13 (flanking_conserved) JAAOAO010000075:27736-28498 + identity 70.7COX13FNAPI_2094 9846-11249 +: pre-mRNA-splicing factor SLU7FNAPI_2094FNAPI_2095 11571-12292 -: 40S ribosomal S9 protein (S7)FNAPI_2095FNAPI_2096 12685-13360 +: 50S ribosomal L2 protein1eFNAPI_2096FNAPI_2097 15125-18711 +: cytoskeleton assembly control SLA2FNAPI_2097FNAPI_2098 21307-22117 -: mating type MAT1-2-3FNAPI_2098FNAPI_2099 23662-24436 +: mating typeFNAPI_2099FNAPI_2100 25204-27219 -: AP endonuclease 2FNAPI_2100FNAPI_2101 27736-28498 +: cytochrome c oxidase subunit 6aFNAPI_2101FNAPI_2102 29358-31816 +: anaphase-promoting complex subunit 5FNAPI_2102FNAPI_2103 32014-32852 -: complex I intermediate-associated CIA30 precursor mitochondrialFNAPI_2103FNAPI_2104 33340-34365 +: Large ribosomal subunit protein mL45FNAPI_210412 kb14 kb16 kb18 kb20 kb22 kb24 kb26 kb28 kb30 kb32 kbJAAOAO010000075
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved15125-18711 +annotatedFNAPI_2097cytoskeleton assembly control SLA2FNAPI_2097 covers 100% of it on the same strand
MAT1-2-1core_MAT23662-24436 +annotatedFNAPI_2099mating typeFNAPI_2099 covers 100% of it on the same strand
APN2flanking_conserved25204-27219 -annotatedFNAPI_2100AP endonuclease 2FNAPI_2100 covers 100% of it on the same strand
COX13flanking_conserved27736-28498 +annotatedFNAPI_2101cytochrome c oxidase subunit 6aFNAPI_2101 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
FNAPI_209821307-22117 -mating type MAT1-2-3