FfujikuroiIMI58289 Fusarium fujikuroi IMI 58289

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, HF679028:1109813-1123106

MATPredictFungiDBSLA2 (flanking_conserved) HF679028:1109813-1113393 + identity 81.6SLA2MAT1-2-1 (core_MAT) HF679028:1118283-1119057 + identity 89.7MAT1-2-1APN2 (flanking_conserved) HF679028:1119820-1121833 - identity 86.4APN2COX13 (flanking_conserved) HF679028:1122345-1123106 + identity 69.8COX13FFUJ_05680 1104559-1105962 +: related to step II splicing factor SLU7FFUJ_05680FFUJ_05681 1106290-1107008 -: probable 40S ribosomal protein S9 (S7)FFUJ_05681FFUJ_05682 1107396-1108071 +: probable ribosomal protein L21.e.A, cytosolicFFUJ_05682FFUJ_05683 1109813-1113393 +: probable cytoskeleton assembly control protein SLA2FFUJ_05683FFUJ_05684 1115927-1116689 -: uncharacterized proteinFFUJ_05684FFUJ_05685 1118283-1119057 +: mating type proteinFFUJ_05685FFUJ_05686 1119820-1121833 -: related to APN2-AP endonuclease, exonuclease III homologFFUJ_05686FFUJ_05687 1122345-1123106 +: related to cytochrome-c oxidase chain VIa precursorFFUJ_05687FFUJ_05688 1123951-1126409 +: related to anaphase-promoting complex subunit 5FFUJ_05688FFUJ_05689 1126607-1127445 -: probable complex I intermediate-associated protein CIA30 precursor, mitochondrialFFUJ_05689FFUJ_05690 1127931-1128956 +: Large ribosomal subunit protein mL45FFUJ_056901106 kb1108 kb1110 kb1112 kb1114 kb1116 kb1118 kb1120 kb1122 kb1124 kb1126 kb1128 kbHF679028
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved1109813-1113393 +annotatedFFUJ_05683probable cytoskeleton assembly control protein SLA2FFUJ_05683 covers 100% of it on the same strand
MAT1-2-1core_MAT1118283-1119057 +annotatedFFUJ_05685mating type proteinFFUJ_05685 covers 100% of it on the same strand
APN2flanking_conserved1119820-1121833 -annotatedFFUJ_05686related to APN2-AP endonuclease, exonuclease III homologFFUJ_05686 covers 100% of it on the same strand
COX13flanking_conserved1122345-1123106 +annotatedFFUJ_05687related to cytochrome-c oxidase chain VIa precursorFFUJ_05687 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
FFUJ_056841115927-1116689 -uncharacterized protein