FcircinatumNRRL25331 Fusarium circinatum NRRL 25331

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, JAAQPE010000072:62491-76579

MATPredictFungiDBCOX13 (flanking_conserved) JAAQPE010000072:62491-63253 - identity 59.3COX13APN2 (flanking_conserved) JAAQPE010000072:63769-65786 + identity 86.4APN2MAT1-1-3 (core_MAT) JAAQPE010000072:66513-67263 - identity 83.3MAT1-1-3MAT1-1-2 (core_MAT) JAAQPE010000072:67658-69013 + identity 83.6MAT1-1-2MAT1-1-1 (core_MAT) JAAQPE010000072:69467-70782 + identity 89.0MAT1-1-1SLA2 (flanking_conserved) JAAQPE010000072:72997-76579 - identity 75.4SLA2FCIRC_2231 56628-57653 -: Large ribosomal subunit protein mL45FCIRC_2231FCIRC_2232 58138-58976 +: complex I intermediate-associated CIA30 precursor mitochondrialFCIRC_2232FCIRC_2233 59173-61631 -: anaphase-promoting complex subunit 5FCIRC_2233FCIRC_2234 62491-63253 -: cytochrome c oxidase subunit 6aFCIRC_2234FCIRC_2235 63769-65786 +: AP endonuclease 2FCIRC_2235FCIRC_2236 66513-67263 -: mating type 1-1-3FCIRC_2236FCIRC_2237 67658-69013 +: mating type MAT1-1-2FCIRC_2237FCIRC_2238 69467-70782 +: mating type MAT1-1-1FCIRC_2238FCIRC_2239 72997-76579 -: cytoskeleton assembly control SLA2FCIRC_2239FCIRC_2240 78299-78973 -: 50S ribosomal L2 protein1eFCIRC_2240FCIRC_2241 79359-80077 +: 40S ribosomal S9 protein (S7)FCIRC_2241FCIRC_2242 80399-81802 -: pre-mRNA-splicing factor SLU7FCIRC_224260 kb64 kb68 kb72 kb76 kb80 kbJAAQPE010000072
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved62491-63253 -annotatedFCIRC_2234cytochrome c oxidase subunit 6aFCIRC_2234 covers 100% of it on the same strand
APN2flanking_conserved63769-65786 +annotatedFCIRC_2235AP endonuclease 2FCIRC_2235 covers 100% of it on the same strand
MAT1-1-3core_MAT66513-67263 -annotatedFCIRC_2236mating type 1-1-3FCIRC_2236 covers 100% of it on the same strand
MAT1-1-2core_MAT67658-69013 +annotatedFCIRC_2237mating type MAT1-1-2FCIRC_2237 covers 100% of it on the same strand
MAT1-1-1core_MAT69467-70782 +annotatedFCIRC_2238mating type MAT1-1-1FCIRC_2238 covers 100% of it on the same strand
SLA2flanking_conserved72997-76579 -annotatedFCIRC_2239cytoskeleton assembly control SLA2FCIRC_2239 covers 100% of it on the same strand