EpasteurianusEp9510 Emergomyces pasteurianus Ep9510
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, LGRN01000028:21777-46402
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| MAT1-2-7 | core_MAT | 21777-21887 - | annotated | AJ78_01293 | Transcription mediator complex subunit Med12 | SRB8 ARM-like domain | domain-containing protein | AJ78_01293 covers 100% of it on the same strand |
| APN2 | flanking_conserved | 29001-31117 - | annotated | AJ78_01294 | DNA-(apurinic or apyrimidinic site) endonuclease 2 | AJ78_01294 covers 100% of it on the same strand |
| COX13 | flanking_conserved | 31715-32446 + | annotated | AJ78_01295 | Cytochrome c oxidase subunit VIa | domain-containing protein | AJ78_01295 covers 100% of it on the same strand |
| MAT1-1-4 | core_MAT | 35400-36838 + | annotated | AJ78_01297 | unspecified product | AJ78_01297 covers 100% of it on the same strand |
| MAT1-1-1 | core_MAT | 37594-38874 + | annotated | AJ78_01298 | Mating-type protein MAT alpha 1 HMG-box | domain-containing protein | AJ78_01298 covers 100% of it on the same strand |
| SLA2 | flanking_conserved | 42124-46402 - | annotated | AJ78_01299 | ANTH domain | I/LWEQ domain | domain-containing protein | AJ78_01299 covers 100% of it on the same strand |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| AJ78_01296 | 33259-34248 + | PAT complex subunit Asterix | domain-containing protein |