EafricanusCBS136260 Emergomyces africanus CBS 136260

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence medium, LGUA01000486:517-8483

MATPredictFungiDBMAT1-1-4 (core_MAT) LGUA01000486:517-1903 - identity 44.3MAT1-1-4COX13 (flanking_conserved) LGUA01000486:4320-5758 - identity 77.8COX13APN2 (flanking_conserved) LGUA01000486:6470-8483 + identity 75.0APN2ACJ72_04272 517-1903 -: unspecified productACJ72_04272ACJ72_04273 3145-4202 -: PAT complex subunit Asterix | domain-containing proteinACJ72_04273ACJ72_04274 4320-5758 -: Cytochrome c oxidase subunit VIa | domain-containing proteinACJ72_04274ACJ72_04275 6470-8483 +: DNA-(apurinic or apyrimidinic site) endonuclease 2ACJ72_04275ACJ72_04276 10942-13709 +: Transcription mediator complex subunit Med12 | SRB8 ARM-like domain | domain-containing proteinACJ72_04276-4 kb-2 kb0 kb2 kb4 kb6 kb8 kb10 kb12 kbLGUA01000486
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MAT1-1-4core_MAT517-1903 -annotatedACJ72_04272unspecified productACJ72_04272 covers 100% of it on the same strand
COX13flanking_conserved4320-5758 -annotatedACJ72_04274Cytochrome c oxidase subunit VIa | domain-containing proteinACJ72_04274 covers 100% of it on the same strand
APN2flanking_conserved6470-8483 +annotatedACJ72_04275DNA-(apurinic or apyrimidinic site) endonuclease 2ACJ72_04275 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
ACJ72_042733145-4202 -PAT complex subunit Asterix | domain-containing protein