DrugosaCBS613 Diutina rugosa CBS 613

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MTL_0: A Ascomycota:MTL, confidence medium, SWFT01000050:289606-299182

MATPredictFungiDBMTLA2 (core_MAT) SWFT01000050:289624-289809 - identity 33.87MTLA2PIK1 (flanking_variable) SWFT01000050:290127-292838 - identity 54.8PIK1OBP1 (flanking_variable) SWFT01000050:293043-294365 - identity 69.2OBP1PAP1 (flanking_variable) SWFT01000050:295932-299182 + identity 68.2PAP1DIURU_001635 284428-286782 -: Exocyst complex component Sec10-like, alpha-helical bundle | F-box domain | domain-containing proteinDIURU_001635DIURU_001636 288096-289004 +: unspecified productDIURU_001636DIURU_001637 289489-290016 -: unspecified productDIURU_001637DIURU_001638 290127-292838 -: Phosphatidylinositol 3- and 4-kinase | Phosphoinositide 3-kinase family, accessory domain (PIK domain) | Yeast phosphatidylinositol-4-OH kinase Pik1 | domain-containing proteinDIURU_001638DIURU_001639 293043-294365 -: Oxysterol-binding protein | domain-containing proteinDIURU_001639DIURU_001640 295932-299182 +: Poly(A) polymerase nucleotidyltransferase domain | Poly(A) polymerase central domain | 60S ribosome biogenesis protein Rrp14 | Poly(A) polymerase predicted RNA binding domain | Surfeit locus protein 6 | domain-containing proteinDIURU_001640DIURU_001641 299378-299911 +: TB2/DP1, HVA22 family | domain-containing proteinDIURU_001641DIURU_001642 300988-303825 +: Calcium-dependent channel, 7TM region, putative phosphate | Cytosolic domain of 10TM putative phosphate transporter | Late exocytosis, associated with Golgi transport | Extracellular tail, of 10TM putative phosphate transporter | domain-containing proteinDIURU_001642DIURU_001643 303887-304645 +: unspecified productDIURU_001643286 kb288 kb290 kb292 kb294 kb296 kb298 kb300 kb302 kb304 kbSWFT01000050
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MTLA2core_MAT289624-289809 -annotatedDIURU_001637unspecified productDIURU_001637 covers 100% of it on the same strand
PIK1flanking_variable290127-292838 -annotatedDIURU_001638Phosphatidylinositol 3- and 4-kinase | Phosphoinositide 3-kinase family, accessory domain (PIK domain) | Yeast phosphatidylinositol-4-OH kinase Pik1 | domain-containing proteinDIURU_001638 covers 100% of it on the same strand
OBP1flanking_variable293043-294365 -annotatedDIURU_001639Oxysterol-binding protein | domain-containing proteinDIURU_001639 covers 100% of it on the same strand
PAP1flanking_variable295932-299182 +annotatedDIURU_001640Poly(A) polymerase nucleotidyltransferase domain | Poly(A) polymerase central domain | 60S ribosome biogenesis protein Rrp14 | Poly(A) polymerase predicted RNA binding domain | Surfeit locus protein 6 | domain-containing proteinDIURU_001640 covers 100% of it on the same strand