CyegresiiCBS114405 Cladophialophora yegresii CBS 114405

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence medium, AMGW01000007:1417656-1442459

MATPredictFungiDBMAT1-2-1 (core_MAT) AMGW01000007:1417656-1418960 + identity 59.3MAT1-2-1APN2 (flanking_conserved) AMGW01000007:1440206-1442459 + identity 64.5APN2A1O7_09628 1415991-1416533 -: unspecified productA1O7_09628A1O7_09629 1417656-1418960 +: HMG (high mobility group) box | domain-containing proteinA1O7_09629A1O7_09630 1422407-1422766 +: unspecified productA1O7_09630A1O7_09631 1423808-1424964 +: unspecified productA1O7_09631A1O7_09632 1425684-1425973 +: unspecified productA1O7_09632A1O7_09633 1427264-1428151 +: Phosphotransferase enzyme family | domain-containing proteinA1O7_09633A1O7_09634 1428645-1429010 -: Family of unknown function (DUF6540) | domain-containing proteinA1O7_09634A1O7_09635 1429737-1439321 -: Intermembrane lipid transfer protein VPS13, C-terminal | VPS13-like family N-terminal region | Vacuolar-sorting associated protein 13, adaptor binding domain | VPS13-like family middle region | domain-containing proteinA1O7_09635A1O7_09636 1440206-1442459 +: DNA-(apurinic or apyrimidinic site) endonuclease 2A1O7_09636A1O7_09637 1443048-1443459 +: unspecified productA1O7_09637A1O7_09638 1444732-1445185 -: unspecified productA1O7_096381416 kb1420 kb1424 kb1428 kb1432 kb1436 kb1440 kb1444 kbAMGW01000007
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MAT1-2-1core_MAT1417656-1418960 +annotatedA1O7_09629HMG (high mobility group) box | domain-containing proteinA1O7_09629 covers 100% of it on the same strand
APN2flanking_conserved1440206-1442459 +annotatedA1O7_09636DNA-(apurinic or apyrimidinic site) endonuclease 2A1O7_09636 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
A1O7_096301422407-1422766 +unspecified product
A1O7_096311423808-1424964 +unspecified product
A1O7_096321425684-1425973 +unspecified product
A1O7_096331427264-1428151 +Phosphotransferase enzyme family | domain-containing protein
A1O7_096341428645-1429010 -Family of unknown function (DUF6540) | domain-containing protein
A1O7_096351429737-1439321 -Intermembrane lipid transfer protein VPS13, C-terminal | VPS13-like family N-terminal region | Vacuolar-sorting associated protein 13, adaptor binding domain | VPS13-like family middle region | domain-containing protein