Cpurpurea20.1 Claviceps purpurea 20.1

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, CAGA01000045:112078-135390

MATPredictFungiDBSLA2 (flanking_conserved) CAGA01000045:112078-115507 + identity 75.0SLA2MAT1-1-1 (core_MAT) CAGA01000045:126350-127639 - identity 46.3MAT1-1-1MAT1-1-2 (core_MAT) CAGA01000045:128635-129117 - identity 36.02MAT1-1-2MAT1-1-3 (core_MAT) CAGA01000045:129868-130540 + identity 44.05MAT1-1-3APN2 (flanking_conserved) CAGA01000045:131813-133887 - identity 77.3APN2COX13 (flanking_conserved) CAGA01000045:134706-135390 + identity 66.0COX13CPUR_06564 106855-108249 +: Pre-mRNA splicing Prp18-interacting factor | domain-containing proteinCPUR_06564CPUR_06565 108639-109510 -: Ribosomal protein S4/S9 N-terminal domain | S4 domain | domain-containing proteinCPUR_06565CPUR_06566 109753-110480 +: Ribosomal protein L21e | domain-containing proteinCPUR_06566CPUR_06567 112078-115507 +: I/LWEQ domain | ANTH domain | domain-containing proteinCPUR_06567CPUR_06568 126350-127639 -: Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinCPUR_06568CPUR_06569 131813-133887 -: DNA-(apurinic or apyrimidinic site) endonuclease 2CPUR_06569CPUR_06570 134706-135390 +: Cytochrome c oxidase subunit VIa | domain-containing proteinCPUR_06570CPUR_06571 136130-138657 +: Anaphase-promoting complex subunit 5 | domain-containing proteinCPUR_06571CPUR_06572 138897-139828 -: Complex I intermediate-associated protein 30 (CIA30) | domain-containing proteinCPUR_06572CPUR_06573 140304-141416 +: unspecified productCPUR_06573108 kb112 kb116 kb120 kb124 kb128 kb132 kb136 kb140 kbCAGA01000045
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved112078-115507 +annotatedCPUR_06567I/LWEQ domain | ANTH domain | domain-containing proteinCPUR_06567 covers 100% of it on the same strand
MAT1-1-1core_MAT126350-127639 -annotatedCPUR_06568Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinCPUR_06568 covers 100% of it on the same strand
MAT1-1-2core_MAT128635-129117 -novel—no FungiDB gene overlaps this MATPredict gene
MAT1-1-3core_MAT129868-130540 +novel—no FungiDB gene overlaps this MATPredict gene
APN2flanking_conserved131813-133887 -annotatedCPUR_06569DNA-(apurinic or apyrimidinic site) endonuclease 2CPUR_06569 covers 100% of it on the same strand
COX13flanking_conserved134706-135390 +annotatedCPUR_06570Cytochrome c oxidase subunit VIa | domain-containing proteinCPUR_06570 covers 100% of it on the same strand