CpseudohaemuloniiB12108 Candida pseudohaemulonii strain B12108

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MTL_0: A Ascomycota:MTL, confidence high, PYFQ01000019:148762-156538

MATPredictFungiDBMTLA1 (core_MAT) PYFQ01000019:148762-149139 - identity 52.0MTLA1MTLA2 (core_MAT) PYFQ01000019:149346-149963 - identity 52.0MTLA2PIK1 (flanking_variable) PYFQ01000019:150053-152689 - identity 76.9PIK1OBP1 (flanking_variable) PYFQ01000019:153400-154677 - identity 85.6OBP1PAP1 (flanking_variable) PYFQ01000019:154904-156538 + identity 87.7PAP1C7M61_004928 140638-145676 -: Exocyst complex component Sec10-like, alpha-helical bundle | Major Facilitator Superfamily | Sugar (and other) transporter | domain-containing proteinC7M61_004928C7M61_004929 146506-148659 +: unspecified productC7M61_004929C7M61_005294 148762-149139 -: mating_type_MTLa1C7M61_005294C7M61_004930 150053-152689 -: Yeast phosphatidylinositol-4-OH kinase Pik1 | Phosphatidylinositol 3- and 4-kinase | domain-containing proteinC7M61_004930C7M61_004931 153400-154677 -: Oxysterol-binding protein | domain-containing proteinC7M61_004931C7M61_004932 154904-156538 +: Poly(A) polymerase PAPaC7M61_004932C7M61_004933 156566-158047 -: Peptidase M16 inactive domain | Insulinase (Peptidase family M16) | domain-containing proteinC7M61_004933C7M61_004934 159424-161406 +: unspecified productC7M61_004934144 kb146 kb148 kb150 kb152 kb154 kb156 kb158 kb160 kbPYFQ01000019
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MTLA1core_MAT148762-149139 -annotatedC7M61_005294mating_type_MTLa1C7M61_005294 covers 100% of it on the same strand
MTLA2core_MAT149346-149963 -novel—no FungiDB gene overlaps this MATPredict gene
PIK1flanking_variable150053-152689 -annotatedC7M61_004930Yeast phosphatidylinositol-4-OH kinase Pik1 | Phosphatidylinositol 3- and 4-kinase | domain-containing proteinC7M61_004930 covers 100% of it on the same strand
OBP1flanking_variable153400-154677 -annotatedC7M61_004931Oxysterol-binding protein | domain-containing proteinC7M61_004931 covers 100% of it on the same strand
PAP1flanking_variable154904-156538 +annotatedC7M61_004932Poly(A) polymerase PAPaC7M61_004932 covers 100% of it on the same strand