CparapsilosisCDC317 Candida parapsilosis CDC317
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Ascomycota_MTL_0: A Ascomycota:MTL, confidence medium, Contig005806_C_parapsilosis_CDC317:830236-838733
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| PAP1 | flanking_variable | 830236-831894 - | annotated | CPAR2_303560 | Ortholog(s) have RNA adenylyltransferase activity, polynucleotide adenylyltransferase activity and role in mRNA polyadenylation, nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts, sno(s)RNA polyadenylation | CPAR2_303560 covers 100% of it on the same strand |
| OBP1 | flanking_variable | 832251-833570 + | annotated | CPAR2_303570 | Ortholog(s) have lipid binding, sterol transfer activity | CPAR2_303570 covers 100% of it on the same strand |
| PIK1 | flanking_variable | 833828-836641 + | annotated | CPAR2_303580 | Ortholog(s) have 1-phosphatidylinositol 4-kinase activity, role in phosphatidylinositol phosphorylation, positive regulation of autophagosome assembly and nucleus, trans-Golgi network localization | CPAR2_303580 covers 100% of it on the same strand |
| MTLA2 | core_MAT | 837296-837953 + | annotated | CPAR2_303590 | Ortholog of C. albicans SC5314 : C5_01750C_A/MTLA2, Debaryomyces hansenii CBS767 : DEHA2E19140g, Candida metapsilosis : CMET_43 and Pichia stipitis Pignal : PICST_33462 | CPAR2_303590 covers 100% of it on the same strand |
| MTLA1 | core_MAT | 838335-838733 + | annotated | CPAR2_303600 | unspecified product | CPAR2_303600 covers 100% of it on the same strand |