CmilitarisATCC34164 Cordyceps militaris ATCC 34164

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, CP023324:6355673-6372067

MATPredictFungiDBSLA2 (flanking_conserved) CP023324:6355673-6359244 + identity 80.9SLA2MAT1-2-1 (core_MAT) CP023324:6366569-6367388 + identity 55.8MAT1-2-1APN2 (flanking_conserved) CP023324:6368643-6370852 - identity 88.6APN2COX13 (flanking_conserved) CP023324:6371303-6372067 + identity 64.9COX13A9K55_008813 6348516-6354900 +: ankyrin 2,3A9K55_008813A9K55_008814 6355673-6359244 +: cytoskeleton assembly control Sla2A9K55_008814A9K55_008815 6362023-6363097 +: unspecified productA9K55_008815A9K55_008816 6363148-6364005 +: unspecified productA9K55_008816A9K55_008817 6366569-6367388 +: mating-type MAT1-2-1A9K55_008817A9K55_008818 6368643-6370852 -: DNA lyaseA9K55_008818A9K55_008819 6371303-6372067 +: Cytochrome c subunit VIaA9K55_008819A9K55_008820 6372694-6375153 +: anaphase-promoting complex subunitA9K55_008820A9K55_008821 6375395-6376183 -: complex I intermediate-associated 30A9K55_008821A9K55_008822 6376762-6377840 +: Membrane Tim44-related Ribosomal L45A9K55_0088226352 kb6356 kb6360 kb6364 kb6368 kb6372 kb6376 kbCP023324
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved6355673-6359244 +annotatedA9K55_008814cytoskeleton assembly control Sla2A9K55_008814 covers 100% of it on the same strand
MAT1-2-1core_MAT6366569-6367388 +annotatedA9K55_008817mating-type MAT1-2-1A9K55_008817 covers 100% of it on the same strand
APN2flanking_conserved6368643-6370852 -annotatedA9K55_008818DNA lyaseA9K55_008818 covers 100% of it on the same strand
COX13flanking_conserved6371303-6372067 +annotatedA9K55_008819Cytochrome c subunit VIaA9K55_008819 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
A9K55_0088156362023-6363097 +unspecified product
A9K55_0088166363148-6364005 +unspecified product