CmetapsilosisBP57 Candida metapsilosis BP57

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MTL_0: A Ascomycota:MTL, confidence high, JAEOAQ010000005:857755-865403

MATPredictFungiDBOBP1 (flanking_variable) JAEOAQ010000005:858905-860206 + identity 69.0OBP1PIK1 (flanking_variable) JAEOAQ010000005:860434-863274 + identity 62.8PIK1MTLA2 (core_MAT) JAEOAQ010000005:864079-864632 + identity 41.2MTLA2MTLA1 (core_MAT) JAEOAQ010000005:864968-865403 + identity 39.02MTLA1I9W82_004113 851659-853398 -: STI1I9W82_004113I9W82_004114 853587-854663 -: FCR3I9W82_004114I9W82_004115 855950-857650 +: Amino acid permease | domain-containing proteinI9W82_004115I9W82_004116 857686-858198 -: HMLALPHA2I9W82_004116I9W82_004117 858905-860206 +: OSH6I9W82_004117I9W82_004118 860434-863274 +: pik1I9W82_004118I9W82_004119 864079-864632 +: hypothetical proteinI9W82_004119I9W82_004120 865711-867858 -: hypothetical proteinI9W82_004120I9W82_004121 867968-872180 +: RCY1I9W82_004121854 kb856 kb858 kb860 kb862 kb864 kb866 kb868 kb870 kbJAEOAQ010000005
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
OBP1flanking_variable858905-860206 +annotatedI9W82_004117OSH6I9W82_004117 covers 100% of it on the same strand
PIK1flanking_variable860434-863274 +annotatedI9W82_004118pik1I9W82_004118 covers 100% of it on the same strand
MTLA2core_MAT864079-864632 +annotatedI9W82_004119hypothetical proteinI9W82_004119 covers 100% of it on the same strand
MTLA1core_MAT864968-865403 +novel—no FungiDB gene overlaps this MATPredict gene

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
I9W82_004116857686-858198 -HMLALPHA2