CimmundaCBS83496 Cladophialophora immunda strain CBS 83496

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence medium, KN847044.1:1019161-1040533

MATPredictFungiDBMAT1-2-1 (core_MAT) KN847044.1:1025402-1025710 - identity 54.37MAT1-2-1MAT1-1-3 (core_MAT) KN847044.1:1025450-1025674 - identity 33.33MAT1-1-3PV07_08669 1017304-1018314 +: hypothetical proteinPV07_08669PV07_08670 1021157-1023615 -: hypothetical proteinPV07_08670PV07_08671 1030430-1031503 -: hypothetical proteinPV07_08671PV07_08672 1032979-1033314 -: hypothetical proteinPV07_08672PV07_08673 1034068-1034701 +: hypothetical proteinPV07_08673PV07_08674 1042619-1044093 +: hypothetical proteinPV07_086741016 kb1020 kb1024 kb1028 kb1032 kb1036 kb1040 kb1044 kbKN847044.1
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MAT1-2-1core_MAT1025402-1025710 -novel—no FungiDB gene overlaps this MATPredict gene
MAT1-1-3core_MAT1025450-1025674 -novel—no FungiDB gene overlaps this MATPredict gene

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
PV07_086701021157-1023615 -hypothetical protein
PV07_086711030430-1031503 -hypothetical protein
PV07_086721032979-1033314 -hypothetical protein
PV07_086731034068-1034701 +hypothetical protein