Cgeophilum1.58 Cenococcum geophilum 1.58
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence medium, KV748191:1981541-1993702
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| COX13 | flanking_conserved | 1981541-1982450 - | annotated | K441DRAFT_658421 | mitochondrial cytochrome c oxidase subunit VIa | K441DRAFT_658421 covers 100% of it on the same strand |
| APN2 | flanking_conserved | 1982806-1985251 + | annotated | K441DRAFT_686539 | DNase I-like protein | K441DRAFT_686539 covers 100% of it on the same strand |
| MAT1-2-1 | core_MAT | 1989736-1989903 - | novel | — | no FungiDB gene overlaps this MATPredict gene | |
| MAT1-1-4 | core_MAT | 1990878-1991399 + | novel | — | no FungiDB gene overlaps this MATPredict gene | |
| MAT1-1-1 | core_MAT | 1992301-1993702 + | annotated | K441DRAFT_751160 | Mating-type protein MAT-1 | K441DRAFT_751160 covers 100% of it on the same strand |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| K441DRAFT_658420 | 1977850-1981590 + | Anaphase-promoting complex subunit 5 | domain-containing protein |
| K441DRAFT_72340 | 1985407-1986152 - | hypothetical protein |
| K441DRAFT_555485 | 1986579-1987573 + | Sugar (and other) transporter | domain-containing protein |