CgattiiEJB2 Cryptococcus gattii EJB2

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Basidiomycota_MAT_0: alpha Basidiomycota:MAT, confidence medium, KN848799:4771-11162

MATPredictFungiDBSTE3 (core_MAT) KN848799:4771-6089 + identity 90.8STE3MFalpha (core_MAT) KN848799:11070-11162 - identity 93.3MFalphaI306_06607 2177-3606 -: electron transfer flavoprotein alpha subunitI306_06607I306_06608 4771-6089 +: pheromone a factor receptorI306_06608I306_06609 7275-9938 +: IKS protein kinaseI306_06609I306_06610 11070-11162 -: hypothetical proteinI306_066100 kb2 kb4 kb6 kb8 kb10 kb12 kb14 kb16 kbKN848799
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
STE3core_MAT4771-6089 +annotatedI306_06608pheromone a factor receptorI306_06608 covers 100% of it on the same strand
MFalphacore_MAT11070-11162 -annotatedI306_06610hypothetical proteinI306_06610 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
I306_066097275-9938 +IKS protein kinase