CeuropaeaCBS101466 Cyphellophora europaea CBS 101466

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence medium, KB822718:2689630-2699866

MATPredictFungiDBCOX13 (flanking_conserved) KB822718:2689630-2690175 - identity 80.8COX13APN2 (flanking_conserved) KB822718:2690460-2692345 + identity 90.9APN2MAT1-1-4 (core_MAT) KB822718:2693750-2694223 - identity 25.595MAT1-1-4MAT1-1-1 (core_MAT) KB822718:2694780-2695922 + identity 40.5MAT1-1-1SLA2 (flanking_conserved) KB822718:2696632-2699866 + identity 84.9SLA2HMPREF1541_02520 2684782-2685756 +: Complex I intermediate-associated protein 30 (CIA30) | domain-containing proteinHMPREF1541_02520HMPREF1541_02521 2685831-2686798 -: phosphoribosylaminoimidazolesuccinocarboxamide synthaseHMPREF1541_02521HMPREF1541_02522 2687148-2689445 +: Anaphase-promoting complex subunit 5 | domain-containing proteinHMPREF1541_02522HMPREF1541_02523 2689630-2690175 -: Cytochrome c oxidase subunit VIa | domain-containing proteinHMPREF1541_02523HMPREF1541_02524 2690460-2692345 +: DNA-(apurinic or apyrimidinic site) endonuclease 2HMPREF1541_02524HMPREF1541_02525 2693339-2694316 -: hypothetical proteinHMPREF1541_02525HMPREF1541_02526 2694780-2695922 +: Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinHMPREF1541_02526HMPREF1541_02527 2696632-2699866 +: ANTH domain | I/LWEQ domain | domain-containing proteinHMPREF1541_02527HMPREF1541_02528 2700715-2701196 +: hypothetical proteinHMPREF1541_02528HMPREF1541_02529 2701347-2704457 -: Pleckstrin homology domain | domain-containing proteinHMPREF1541_025292686 kb2688 kb2690 kb2692 kb2694 kb2696 kb2698 kb2700 kb2702 kb2704 kbKB822718
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved2689630-2690175 -annotatedHMPREF1541_02523Cytochrome c oxidase subunit VIa | domain-containing proteinHMPREF1541_02523 covers 100% of it on the same strand
APN2flanking_conserved2690460-2692345 +annotatedHMPREF1541_02524DNA-(apurinic or apyrimidinic site) endonuclease 2HMPREF1541_02524 covers 100% of it on the same strand
MAT1-1-4core_MAT2693750-2694223 -annotatedHMPREF1541_02525hypothetical proteinHMPREF1541_02525 covers 100% of it on the same strand
MAT1-1-1core_MAT2694780-2695922 +annotatedHMPREF1541_02526Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinHMPREF1541_02526 covers 100% of it on the same strand
SLA2flanking_conserved2696632-2699866 +annotatedHMPREF1541_02527ANTH domain | I/LWEQ domain | domain-containing proteinHMPREF1541_02527 covers 100% of it on the same strand