CdubliniensisCD36 Candida dubliniensis CD36

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MTL_0: alpha Ascomycota:MTL, confidence high, FM992692:387083-395374

MATPredictFungiDBMTLalpha2 (core_MAT) FM992692:387083-387705 - identity 100.0MTLalpha2OBP1 (flanking_variable) FM992692:388413-389702 + identity 99.3OBP1PIK1 (flanking_variable) FM992692:389940-392873 + identity 99.9PIK1MTLalpha1 (core_MAT) FM992692:393082-393663 + identity 100.0MTLalpha1PAP1 (flanking_variable) FM992692:393698-395374 - identity 100.0PAP1CD36_51530 384649-386445 +: Amino acid permease | domain-containing proteinCD36_51530CD36_51535 386489-386635 +: hypothetical proteinCD36_51535CD36_51540 387083-387705 -: MTLALPHA2CD36_51540CD36_51550 388413-389702 +: Oxysterol-binding protein | domain-containing proteinCD36_51550CD36_51560 389940-392873 +: 1-phosphatidylinositol 4-kinaseCD36_51560CD36_51570 393082-393663 +: MTLALPHA1CD36_51570CD36_51580 393698-395374 -: PAP1CD36_51580CD36_51590 395973-398672 -: hypothetical proteinCD36_51590CD36_51600 399125-401668 +: Exocyst complex component Sec10-like, alpha-helical bundle | F-box domain | domain-containing proteinCD36_51600384 kb386 kb388 kb390 kb392 kb394 kb396 kb398 kb400 kbFM992692
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MTLalpha2core_MAT387083-387705 -annotatedCD36_51540MTLALPHA2CD36_51540 covers 100% of it on the same strand
OBP1flanking_variable388413-389702 +annotatedCD36_51550Oxysterol-binding protein | domain-containing proteinCD36_51550 covers 100% of it on the same strand
PIK1flanking_variable389940-392873 +annotatedCD36_515601-phosphatidylinositol 4-kinaseCD36_51560 covers 100% of it on the same strand
MTLalpha1core_MAT393082-393663 +annotatedCD36_51570MTLALPHA1CD36_51570 covers 100% of it on the same strand
PAP1flanking_variable393698-395374 -annotatedCD36_51580PAP1CD36_51580 covers 100% of it on the same strand