CaurisB11245 Candida auris strain B11245

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MTL_0: A Ascomycota:MTL, confidence high, CP043444:1578692-1586525

MATPredictFungiDBPAP1 (flanking_variable) CP043444:1578692-1579684 - identity 100.0PAP1OBP1 (flanking_variable) CP043444:1580550-1581839 + identity 100.0OBP1PIK1 (flanking_variable) CP043444:1583548-1585134 + identity 100.0PIK1MTLA2 (core_MAT) CP043444:1585220-1585833 + identity 100.0MTLA2MTLA1 (core_MAT) CP043444:1585918-1586525 + identity 98.76MTLA1CJJ09_003702 1574714-1576009 +: Protein arginine N-methyltransferase 2CJJ09_003702CJJ09_003703 1577173-1577796 +: mitochondrial-processing peptidase subunit alphaCJJ09_003703CJJ09_003704 1578314-1578649 +: unspecified productCJJ09_003704CJJ09_003705 1578692-1579684 -: Poly(A) polymerase predicted RNA binding domain | Poly(A) polymerase central domain | domain-containing proteinCJJ09_003705CJJ09_003706 1580550-1581839 +: Oxysterol-binding protein | domain-containing proteinCJJ09_003706CJJ09_003707 1583548-1585134 +: Phosphatidylinositol 3- and 4-kinase | domain-containing proteinCJJ09_003707CJJ09_003708 1586718-1588862 -: unspecified productCJJ09_003708CJJ09_003709 1589666-1590901 +: Exocyst complex component Sec10-like, alpha-helical bundle | domain-containing proteinCJJ09_003709CJJ09_003710 1591002-1591547 +: Exocyst complex component Sec10-like, alpha-helical bundle | domain-containing proteinCJJ09_0037101574 kb1576 kb1578 kb1580 kb1582 kb1584 kb1586 kb1588 kb1590 kbCP043444
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
PAP1flanking_variable1578692-1579684 -annotatedCJJ09_003705Poly(A) polymerase predicted RNA binding domain | Poly(A) polymerase central domain | domain-containing proteinCJJ09_003705 covers 100% of it on the same strand
OBP1flanking_variable1580550-1581839 +annotatedCJJ09_003706Oxysterol-binding protein | domain-containing proteinCJJ09_003706 covers 100% of it on the same strand
PIK1flanking_variable1583548-1585134 +annotatedCJJ09_003707Phosphatidylinositol 3- and 4-kinase | domain-containing proteinCJJ09_003707 covers 100% of it on the same strand
MTLA2core_MAT1585220-1585833 +novel—no FungiDB gene overlaps this MATPredict gene
MTLA1core_MAT1585918-1586525 +novel—no FungiDB gene overlaps this MATPredict gene