AversicolorCBS583.65 Aspergillus versicolor CBS 583.65

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence medium, KV878127:2870310-2889382

MATPredictFungiDBCOX13 (flanking_conserved) KV878127:2870310-2873341 - identity 89.1COX13APN2 (flanking_conserved) KV878127:2873650-2875779 + identity 88.6APN2MAT1-2-1 (core_MAT) KV878127:2880609-2881665 - identity 71.1MAT1-2-1MAT1-2-4 (core_MAT) KV878127:2882201-2883148 + identity 46.0MAT1-2-4CIMG_00407 (core_MAT) KV878127:2882787-2882927 + identity 42.308CIMG_00407SLA2 (flanking_conserved) KV878127:2885494-2889382 - identity 89.5SLA2ASPVEDRAFT_82215 2865609-2866780 +: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 domain-containing proteinASPVEDRAFT_82215ASPVEDRAFT_40204 2866521-2868031 -: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase)ASPVEDRAFT_40204ASPVEDRAFT_128383 2868583-2869930 -: Glycosyltransferase family 69 proteinASPVEDRAFT_128383ASPVEDRAFT_51798 2870310-2873341 -: FAD-binding domain-containing proteinASPVEDRAFT_51798ASPVEDRAFT_82220 2873650-2875779 +: DNA-(apurinic or apyrimidinic site) endonuclease 2ASPVEDRAFT_82220ASPVEDRAFT_40208 2876554-2879572 -: Anaphase-promoting complex subunit 5 (Cyclosome subunit 5)ASPVEDRAFT_40208ASPVEDRAFT_82222 2880609-2881665 -: HMG box domain-containing proteinASPVEDRAFT_82222ASPVEDRAFT_149602 2882056-2883148 +: Mating locus proteinASPVEDRAFT_149602ASPVEDRAFT_40212 2885005-2889620 -: Cytoskeleton assembly control protein Sla2ASPVEDRAFT_40212ASPVEDRAFT_128850 2890139-2892970 -: SMP-LTD domain-containing proteinASPVEDRAFT_128850ASPVEDRAFT_126764 2893975-2895843 -: Transcription initiation factor TFIID subunit 12 domain-containing proteinASPVEDRAFT_1267642868 kb2872 kb2876 kb2880 kb2884 kb2888 kb2892 kbKV878127
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved2870310-2873341 -annotatedASPVEDRAFT_51798FAD-binding domain-containing proteinASPVEDRAFT_51798 covers 100% of it on the same strand
APN2flanking_conserved2873650-2875779 +annotatedASPVEDRAFT_82220DNA-(apurinic or apyrimidinic site) endonuclease 2ASPVEDRAFT_82220 covers 100% of it on the same strand
MAT1-2-1core_MAT2880609-2881665 -annotatedASPVEDRAFT_82222HMG box domain-containing proteinASPVEDRAFT_82222 covers 100% of it on the same strand
MAT1-2-4core_MAT2882201-2883148 +annotatedASPVEDRAFT_149602Mating locus proteinASPVEDRAFT_149602 covers 100% of it on the same strand
CIMG_00407core_MAT2882787-2882927 +annotatedASPVEDRAFT_149602Mating locus proteinASPVEDRAFT_149602 covers 100% of it on the same strand
SLA2flanking_conserved2885494-2889382 -annotatedASPVEDRAFT_40212Cytoskeleton assembly control protein Sla2ASPVEDRAFT_40212 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
ASPVEDRAFT_402082876554-2879572 -Anaphase-promoting complex subunit 5 (Cyclosome subunit 5)